| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:27 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the SWATH2stats package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SWATH2stats.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1912/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SWATH2stats 1.24.0 (landing page) Peter Blattmann
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: SWATH2stats |
| Version: 1.24.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SWATH2stats_1.24.0.tar.gz && rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SWATH2stats_1.24.0.zip && rm SWATH2stats_1.24.0.tar.gz SWATH2stats_1.24.0.zip |
| StartedAt: 2022-04-12 05:11:10 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:13:11 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 121.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SWATH2stats_1.24.0.tar.gz && rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SWATH2stats_1.24.0.zip && rm SWATH2stats_1.24.0.tar.gz SWATH2stats_1.24.0.zip
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100 2667k 100 2667k 0 0 1222k 0 0:00:02 0:00:02 --:--:-- 1223k
install for i386
* installing *source* package 'SWATH2stats' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SWATH2stats'
finding HTML links ... done
JPP_update html
MSstats_data html
OpenSWATH_data html
Spyogenes html
Study_design html
add_genesymbol html
assess_decoy_rate html
assess_fdr_byrun html
assess_fdr_overall html
convert4MSstats html
convert4PECA html
convert4aLFQ html
convert4mapDIA html
convert4pythonscript html
convert_protein_ids html
count_analytes html
disaggregate html
filter_all_peptides html
filter_mscore html
filter_mscore_condition html
filter_mscore_fdr html
filter_mscore_freqobs html
filter_on_max_peptides html
filter_on_min_peptides html
filter_proteotypic_peptides html
import_data html
load_mart html
mscore4assayfdr html
mscore4pepfdr html
mscore4protfdr html
plot.fdr_cube html
plot.fdr_table html
plot_correlation_between_samples html
plot_variation html
plot_variation_vs_total html
reduce_OpenSWATH_output html
removeDecoyProteins html
rmDecoyProt html
sample_annotation html
transform_MSstats_OpenSWATH html
unifyProteinGroupLabels html
validate_columns html
write_matrix_peptides html
write_matrix_proteins html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SWATH2stats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SWATH2stats' as SWATH2stats_1.24.0.zip
* DONE (SWATH2stats)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SWATH2stats' successfully unpacked and MD5 sums checked