Nolwenn Le Meur
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/SLGI |
| git_branch: RELEASE_3_14 |
| git_last_commit: b4f5841 |
| git_last_commit_date: 2021-10-26 11:51:49 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:22 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the SLGI package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SLGI.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1817/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SLGI 1.54.0 (landing page) Nolwenn Le Meur
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: SLGI |
| Version: 1.54.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SLGI_1.54.0.tar.gz && rm -rf SLGI.buildbin-libdir && mkdir SLGI.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SLGI.buildbin-libdir SLGI_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SLGI_1.54.0.zip && rm SLGI_1.54.0.tar.gz SLGI_1.54.0.zip |
| StartedAt: 2022-04-12 07:21:24 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:22:56 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 91.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SLGI_1.54.0.tar.gz && rm -rf SLGI.buildbin-libdir && mkdir SLGI.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SLGI.buildbin-libdir SLGI_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SLGI_1.54.0.zip && rm SLGI_1.54.0.tar.gz SLGI_1.54.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
16 8105k 16 1299k 0 0 1654k 0 0:00:04 --:--:-- 0:00:04 1655k
47 8105k 47 3840k 0 0 2145k 0 0:00:03 0:00:01 0:00:02 2145k
81 8105k 81 6574k 0 0 2359k 0 0:00:03 0:00:02 0:00:01 2359k
100 8105k 100 8105k 0 0 2374k 0 0:00:03 0:00:03 --:--:-- 2375k
install for i386
* installing *source* package 'SLGI' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'BiocGenerics' for request: 'plot' when loading 'SLGI'
** help
*** installing help indices
converting help for package 'SLGI'
finding HTML links ... done
Atong html
AtongFnDomain html
AtongPair html
Boeke html
SDL html
SGA html
SGD.SL html
TFmat html
byComplex html
comemberIn html
compare html
congruence html
createSquareMatrix html
dSLAM.GPL1444 html
domainDist html
essglist html
getInteraction html
getSharedDomains html
getSharedInteraction html
getTestedPairs html
getUniquePairs html
gi2005 html
gi2007 html
gi2Interactome html
hyperG html
iSummary html
modelSLGI html
normInteraction html
plot html
seqMatcherAlign html
sharedBy html
sharedInt html
siResult-class html
test2Interact html
topInteraction html
twoWayTable html
withinComplex html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'BiocGenerics' for request: 'plot' when loading 'SLGI'
** testing if installed package can be loaded from final location
No methods found in package 'BiocGenerics' for request: 'plot' when loading 'SLGI'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SLGI' ...
** testing if installed package can be loaded
No methods found in package 'BiocGenerics' for request: 'plot' when loading 'SLGI'
* MD5 sums
packaged installation of 'SLGI' as SLGI_1.54.0.zip
* DONE (SLGI)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SLGI' successfully unpacked and MD5 sums checked