Multiple platform build/check report for BioC 3.14 - BUILD results for Rhtslib on tokay2

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This page was generated on 2022-04-13 12:07:13 -0400 (Wed, 13 Apr 2022).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.4 LTS)	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4324
tokay2	Windows Server 2012 R2 Standard	x64	4.1.3 (2022-03-10) -- "One Push-Up"	4077
machv2	macOS 10.14.6 Mojave	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4137
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for Rhtslib on tokay2

To the developers/maintainers of the Rhtslib package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rhtslib.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Rhtslib 1.26.0 (landing page)
Bioconductor Package Maintainer

Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)

git_url: https://git.bioconductor.org/packages/Rhtslib

git_branch: RELEASE_3_14

git_last_commit: f5b20e9

git_last_commit_date: 2021-10-26 12:18:59 -0400 (Tue, 26 Oct 2021)

nebbiolo2

Linux (Ubuntu 20.04.4 LTS) / x86_64

WARNINGS

tokay2

Windows Server 2012 R2 Standard / x64

WARNINGS

machv2

macOS 10.14.6 Mojave / x86_64

Summary

Package: Rhtslib

Version: 1.26.0

Command: chmod a+r Rhtslib -R && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rhtslib

StartedAt: 2022-04-12 13:41:24 -0400 (Tue, 12 Apr 2022)

EndedAt: 2022-04-12 13:44:39 -0400 (Tue, 12 Apr 2022)

EllapsedTime: 194.6 seconds

RetCode: 0

Status: OK

PackageFile: Rhtslib_1.26.0.tar.gz

PackageFileSize: 1.402 MiB

Command output

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###
### Running command:
###
###   chmod a+r Rhtslib -R && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rhtslib
###
##############################################################################
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* checking for file 'Rhtslib/DESCRIPTION' ... OK
* preparing 'Rhtslib':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building 'Rhtslib_1.26.0.tar.gz'
Warning: file 'Rhtslib/src/htslib-1.7/configure' did not have execute permissions: corrected