Caleb Class
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/NanoTube |
| git_branch: RELEASE_3_14 |
| git_last_commit: f066025 |
| git_last_commit_date: 2021-10-26 13:10:49 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:59 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the NanoTube package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/NanoTube.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1269/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| NanoTube 1.0.0 (landing page) Caleb Class
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: NanoTube |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/NanoTube_1.0.0.tar.gz && rm -rf NanoTube.buildbin-libdir && mkdir NanoTube.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NanoTube.buildbin-libdir NanoTube_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL NanoTube_1.0.0.zip && rm NanoTube_1.0.0.tar.gz NanoTube_1.0.0.zip |
| StartedAt: 2022-04-12 04:47:59 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:49:16 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 77.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/NanoTube_1.0.0.tar.gz && rm -rf NanoTube.buildbin-libdir && mkdir NanoTube.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NanoTube.buildbin-libdir NanoTube_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL NanoTube_1.0.0.zip && rm NanoTube_1.0.0.tar.gz NanoTube_1.0.0.zip
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install for i386
* installing *source* package 'NanoTube' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'NanoTube'
finding HTML links ... done
ExamplePathways html
ExampleResults html
NanoTube html
deVolcano html
fgseaPostprocessing html
fgseaPostprocessingXLSX html
fgseaToLEdge html
gm_mean html
groupFGSEA html
groupedGSEAtoStackedReport html
limmaToFGSEA html
makeDiffExprFile html
makeFGSEAmasterTable html
makeNanoStringSetFromEset html
nanostringPCA html
negativeQC html
normalize_housekeeping html
normalize_pos_controls html
nsdiffToFGSEA html
positiveQC html
processNanostringData html
read_cpdb_sourceDBs html
read_cpdb_tab html
read_merge_rcc html
read_rcc html
read_sampleData html
remove_background html
runLimmaAnalysis html
unzip_dirs html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'NanoTube' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NanoTube' as NanoTube_1.0.0.zip
* DONE (NanoTube)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'NanoTube' successfully unpacked and MD5 sums checked