Nathan Sheffield
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/LOLA |
| git_branch: RELEASE_3_14 |
| git_last_commit: 31e3a51 |
| git_last_commit_date: 2021-10-26 12:22:25 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:48 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the LOLA package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/LOLA.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1011/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| LOLA 1.24.0 (landing page) Nathan Sheffield
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: LOLA |
| Version: 1.24.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/LOLA_1.24.0.tar.gz && rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOLA.buildbin-libdir LOLA_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL LOLA_1.24.0.zip && rm LOLA_1.24.0.tar.gz LOLA_1.24.0.zip |
| StartedAt: 2022-04-12 04:46:32 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:48:07 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 94.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/LOLA_1.24.0.tar.gz && rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOLA.buildbin-libdir LOLA_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL LOLA_1.24.0.zip && rm LOLA_1.24.0.tar.gz LOLA_1.24.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
91 534k 91 490k 0 0 1024k 0 --:--:-- --:--:-- --:--:-- 1023k
100 534k 100 534k 0 0 694k 0 --:--:-- --:--:-- --:--:-- 694k
install for i386
* installing *source* package 'LOLA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'LOLA'
finding HTML links ... done
LOLA html
buildRestrictedUniverse html
checkUniverseAppropriateness html
cleanws html
countOverlapsAnyRev html
extractEnrichmentOverlaps html
getRegionFile html
getRegionSet html
lapplyAlias html
listRegionSets html
listToGRangesList html
loadRegionDB html
mergeRegionDBs html
nlist html
plotTopLOLAEnrichments html
readBed html
readCollection html
readCollectionAnnotation html
readCollectionFiles html
readRegionGRL html
readRegionSetAnnotation html
redefineUserSets html
replaceFileExtension html
runLOLA html
sampleGRL html
setLapplyAlias html
setSharedDataDir html
splitDataTable html
splitFileIntoCollection html
userSets html
userUniverse html
write.tsv html
writeCombinedEnrichment html
writeDataTableSplitByColumn html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'LOLA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'LOLA' as LOLA_1.24.0.zip
* DONE (LOLA)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'LOLA' successfully unpacked and MD5 sums checked