| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:30 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the ENCODExplorer package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ENCODExplorer.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 575/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Charles Joly Beauparlant
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: ENCODExplorer |
| Version: 2.20.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ENCODExplorer_2.20.0.tar.gz && rm -rf ENCODExplorer.buildbin-libdir && mkdir ENCODExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ENCODExplorer.buildbin-libdir ENCODExplorer_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ENCODExplorer_2.20.0.zip && rm ENCODExplorer_2.20.0.tar.gz ENCODExplorer_2.20.0.zip |
| StartedAt: 2022-04-12 06:07:31 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:09:41 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 130.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ENCODExplorer_2.20.0.tar.gz && rm -rf ENCODExplorer.buildbin-libdir && mkdir ENCODExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ENCODExplorer.buildbin-libdir ENCODExplorer_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ENCODExplorer_2.20.0.zip && rm ENCODExplorer_2.20.0.tar.gz ENCODExplorer_2.20.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
40 763k 40 308k 0 0 687k 0 0:00:01 --:--:-- 0:00:01 686k
100 763k 100 763k 0 0 933k 0 --:--:-- --:--:-- --:--:-- 932k
install for i386
* installing *source* package 'ENCODExplorer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ENCODExplorer'
finding HTML links ... done
ENCODEBindingConsensus-class html
finding level-2 HTML links ... done
ENCODEExpressionSummary-class html
ENCODESummary-class html
ENCODExplorer html
GenomicOverlaps-class html
GenomicOverlaps html
buildConsensusPeaks html
buildExpressionSummary html
choose_interactive_value html
combined_regions-GenomicOverlaps-method
html
combined_regions-set-GenomicOverlaps-GRanges-method
html
consensus_indices html
consensus_regions html
createDesign html
downloadEncode html
download_dt_file html
download_single_file html
fuzzySearch html
get_encode_df html
get_encode_df_demo html
get_encode_df_full html
initial_regions-GenomicOverlaps-method
html
intersect_indices html
intersect_matrix html
intersect_regions html
length-GenomicOverlaps-method html
names-GenomicOverlaps-method html
names-set-GenomicOverlaps-character-method
html
pairwise_overlap html
queryConsensusPeaks html
queryEncode html
queryEncodeGeneric html
queryExpressionGeneric html
queryGeneExpression html
queryTranscriptExpression html
searchEncode html
searchToquery html
shinyEncode html
split_by_metadata html
union_indices html
union_regions html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'ENCODExplorer' is deprecated and will be removed from
Bioconductor version 3.15
** testing if installed package can be loaded from final location
Warning: Package 'ENCODExplorer' is deprecated and will be removed from
Bioconductor version 3.15
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ENCODExplorer' ...
** testing if installed package can be loaded
Warning: Package 'ENCODExplorer' is deprecated and will be removed from
Bioconductor version 3.15
* MD5 sums
packaged installation of 'ENCODExplorer' as ENCODExplorer_2.20.0.zip
* DONE (ENCODExplorer)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'ENCODExplorer' successfully unpacked and MD5 sums checked