| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:26 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the DelayedRandomArray package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DelayedRandomArray.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 480/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DelayedRandomArray 1.2.0 (landing page) Aaron Lun
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: DelayedRandomArray |
| Version: 1.2.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DelayedRandomArray_1.2.0.tar.gz && rm -rf DelayedRandomArray.buildbin-libdir && mkdir DelayedRandomArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedRandomArray.buildbin-libdir DelayedRandomArray_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DelayedRandomArray_1.2.0.zip && rm DelayedRandomArray_1.2.0.tar.gz DelayedRandomArray_1.2.0.zip |
| StartedAt: 2022-04-12 05:25:17 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:28:37 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 199.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DelayedRandomArray_1.2.0.tar.gz && rm -rf DelayedRandomArray.buildbin-libdir && mkdir DelayedRandomArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedRandomArray.buildbin-libdir DelayedRandomArray_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DelayedRandomArray_1.2.0.zip && rm DelayedRandomArray_1.2.0.tar.gz DelayedRandomArray_1.2.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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100 24760 100 24760 0 0 206k 0 --:--:-- --:--:-- --:--:-- 208k
install for i386
* installing *source* package 'DelayedRandomArray' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c index_server.cpp -o index_server.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c recycle_vector.cpp -o recycle_vector.o
recycle_vector.cpp: In function 'Rcpp::NumericVector recycle_vector(Rcpp::NumericVector, Rcpp::IntegerVector, Rcpp::List)':
recycle_vector.cpp:12:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
for (int i = 0; i < ndims; ++i){
~~^~~~~~~
recycle_vector.cpp:21:28: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'const int' [-Wsign-compare]
while (current_pos < limit) {
~~~~~~~~~~~~^~~~~~~
recycle_vector.cpp:37:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
for (int i = 0; i < ndims; ++i) {
~~^~~~~~~
recycle_vector.cpp:48:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
for (int i = 0; i < ndims; ++i) {
~~^~~~~~~
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sample_standard_uniform.cpp -o sample_standard_uniform.o
In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/arg.hpp:25,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/placeholders.hpp:24,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/iterator/iterator_categories.hpp:16,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/iterator/iterator_concepts.hpp:10,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/range/concepts.hpp:20,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/range/size_type.hpp:20,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/range/size.hpp:21,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/random/hyperexponential_distribution.hpp:29,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/random.hpp:70,
from sample_standard_uniform.cpp:4:
C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses]
failed ************ (Pred::************
^
C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses]
failed ************ (boost::mpl::not_<Pred>::************
^
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o DelayedRandomArray.dll tmp.def RcppExports.o index_server.o recycle_vector.o sample_standard_uniform.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/DelayedRandomArray.buildbin-libdir/00LOCK-DelayedRandomArray/00new/DelayedRandomArray/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'DelayedRandomArray'
finding HTML links ... done
RandomArraySeed-class html
finding level-2 HTML links ... done
RandomBetaArray-class html
RandomBinomArray-class html
RandomCauchyArray-class html
RandomChisqArray-class html
RandomExpArray-class html
RandomFArray-class html
RandomGammaArray-class html
RandomGeomArray-class html
RandomHyperArray-class html
RandomLnormArray-class html
RandomLogisArray-class html
RandomNbinomArray-class html
RandomNormArray-class html
RandomPoisArray-class html
RandomTArray-class html
RandomUnifArray-class html
RandomWeibullArray-class html
RandomWilcoxArray-class html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DelayedRandomArray' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c index_server.cpp -o index_server.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c recycle_vector.cpp -o recycle_vector.o
recycle_vector.cpp: In function 'Rcpp::NumericVector recycle_vector(Rcpp::NumericVector, Rcpp::IntegerVector, Rcpp::List)':
recycle_vector.cpp:12:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
for (int i = 0; i < ndims; ++i){
~~^~~~~~~
recycle_vector.cpp:21:28: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'const int' [-Wsign-compare]
while (current_pos < limit) {
~~~~~~~~~~~~^~~~~~~
recycle_vector.cpp:37:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
for (int i = 0; i < ndims; ++i) {
~~^~~~~~~
recycle_vector.cpp:48:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
for (int i = 0; i < ndims; ++i) {
~~^~~~~~~
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/dqrng/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sample_standard_uniform.cpp -o sample_standard_uniform.o
In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/arg.hpp:25,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/placeholders.hpp:24,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/iterator/iterator_categories.hpp:16,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/iterator/iterator_concepts.hpp:10,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/range/concepts.hpp:20,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/range/size_type.hpp:20,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/range/size.hpp:21,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/random/hyperexponential_distribution.hpp:29,
from C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/random.hpp:70,
from sample_standard_uniform.cpp:4:
C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses]
failed ************ (Pred::************
^
C:/Users/biocbuild/bbs-3.14-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses]
failed ************ (boost::mpl::not_<Pred>::************
^
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o DelayedRandomArray.dll tmp.def RcppExports.o index_server.o recycle_vector.o sample_standard_uniform.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/DelayedRandomArray.buildbin-libdir/DelayedRandomArray/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DelayedRandomArray' as DelayedRandomArray_1.2.0.zip
* DONE (DelayedRandomArray)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'DelayedRandomArray' successfully unpacked and MD5 sums checked