Todd Creasy
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/BubbleTree |
| git_branch: RELEASE_3_14 |
| git_last_commit: c74ad0d |
| git_last_commit_date: 2021-10-26 12:18:49 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:16 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the BubbleTree package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BubbleTree.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 222/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BubbleTree 2.24.0 (landing page) Todd Creasy
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: BubbleTree |
| Version: 2.24.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BubbleTree_2.24.0.tar.gz && rm -rf BubbleTree.buildbin-libdir && mkdir BubbleTree.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BubbleTree.buildbin-libdir BubbleTree_2.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BubbleTree_2.24.0.zip && rm BubbleTree_2.24.0.tar.gz BubbleTree_2.24.0.zip |
| StartedAt: 2022-04-12 07:12:18 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:15:19 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 180.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BubbleTree_2.24.0.tar.gz && rm -rf BubbleTree.buildbin-libdir && mkdir BubbleTree.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BubbleTree.buildbin-libdir BubbleTree_2.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BubbleTree_2.24.0.zip && rm BubbleTree_2.24.0.tar.gz BubbleTree_2.24.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2 23.7M 2 593k 0 0 884k 0 0:00:27 --:--:-- 0:00:27 883k
9 23.7M 9 2333k 0 0 1397k 0 0:00:17 0:00:01 0:00:16 1397k
18 23.7M 18 4492k 0 0 1683k 0 0:00:14 0:00:02 0:00:12 1683k
27 23.7M 27 6619k 0 0 1805k 0 0:00:13 0:00:03 0:00:10 1805k
39 23.7M 39 9664k 0 0 2071k 0 0:00:11 0:00:04 0:00:07 2071k
56 23.7M 56 13.3M 0 0 2407k 0 0:00:10 0:00:05 0:00:05 2611k
69 23.7M 69 16.3M 0 0 2517k 0 0:00:09 0:00:06 0:00:03 2891k
80 23.7M 80 19.0M 0 0 2542k 0 0:00:09 0:00:07 0:00:02 3000k
90 23.7M 90 21.5M 0 0 2545k 0 0:00:09 0:00:08 0:00:01 3086k
100 23.7M 100 23.7M 0 0 2610k 0 0:00:09 0:00:09 --:--:-- 3150k
install for i386
* installing *source* package 'BubbleTree' ...
** using staged installation
It is recommended to use 'given' instead of 'middle'.
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BubbleTree'
finding HTML links ... done
Annotate html
BTreePlotter html
BTreePredictor html
RBD html
RscoreTrack html
TrackPlotter html
all.somatic.lst html
allCNV.lst html
allCall.lst html
allHetero.lst html
allRBD.lst html
annoByGenesAndCyto html
bafTrack html
btcompare html
btpredict html
cancer.genes.minus2 html
centromere.dat html
cnv.gr html
cyto.gr html
drawBTree html
drawBubbles html
drawFeatures html
gene.uni.clean.gr html
getTracks html
heteroLociTrack html
hg19.seqinfo html
info html
loadRBD html
makeRBD html
mergeSnpCnv html
saveXLS html
snp.gr html
trackBTree html
vol.genes html
xyTrack html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BubbleTree' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BubbleTree' as BubbleTree_2.24.0.zip
* DONE (BubbleTree)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'BubbleTree' successfully unpacked and MD5 sums checked