Joseph N Paulson
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/yarn |
| Branch: RELEASE_3_12 |
| Last Commit: ff5a18c |
| Last Changed Date: 2020-10-27 11:19:26 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:34:13 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the yarn package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1970/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| yarn 1.16.0 (landing page) Joseph N Paulson
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: yarn |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/yarn_1.16.0.tar.gz && rm -rf yarn.buildbin-libdir && mkdir yarn.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=yarn.buildbin-libdir yarn_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL yarn_1.16.0.zip && rm yarn_1.16.0.tar.gz yarn_1.16.0.zip |
| StartedAt: 2021-05-05 18:46:59 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:48:39 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 100.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/yarn_1.16.0.tar.gz && rm -rf yarn.buildbin-libdir && mkdir yarn.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=yarn.buildbin-libdir yarn_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL yarn_1.16.0.zip && rm yarn_1.16.0.tar.gz yarn_1.16.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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install for i386
* installing *source* package 'yarn' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'yarn'
finding HTML links ... done
annotateFromBiomart html
bladder html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmp0SUlMT/R.INSTALL2bfc4c3b2ba9/yarn/man/bladder.Rd:7: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
checkMisAnnotation html
checkTissuesToMerge html
downloadGTEx html
extractMatrix html
filterGenes html
filterLowGenes html
filterMissingGenes html
filterSamples html
normalizeTissueAware html
plotCMDS html
plotDensity html
plotHeatmap html
qsmooth html
qstats html
skin html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmp0SUlMT/R.INSTALL2bfc4c3b2ba9/yarn/man/skin.Rd:7: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'yarn' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'yarn' as yarn_1.16.0.zip
* DONE (yarn)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'yarn' successfully unpacked and MD5 sums checked