Back to "Blame Jeroen" build/check report for BioC 3.11 |
This page was generated on 2020-04-15 03:20:10 -0400 (Wed, 15 Apr 2020).
These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html) |
TO THE DEVELOPERS/MAINTAINERS OF THE microRNA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 54/89 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||
microRNA 1.45.0 "James F. Reid"
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] |
Package: microRNA |
Version: 1.45.0 |
Command: rm -rf microRNA.buildbin-libdir && mkdir microRNA.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microRNA.buildbin-libdir microRNA_1.45.0.tar.gz |
StartedAt: 2020-04-14 23:49:51 -0400 (Tue, 14 Apr 2020) |
EndedAt: 2020-04-14 23:50:18 -0400 (Tue, 14 Apr 2020) |
EllapsedTime: 27.3 seconds |
RetCode: 0 |
Status: OK |
PackageFile: microRNA_1.45.0.zip |
PackageFileSize: 5.911 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf microRNA.buildbin-libdir && mkdir microRNA.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microRNA.buildbin-libdir microRNA_1.45.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'microRNA' ... ** using staged installation ** libs /mingw32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c longest_common_substring.cpp -o longest_common_substring.o longest_common_substring.cpp: In function 'SEXPREC* longest_common_substring(SEXP)': longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare] if (i == len[index] - 1) { // ignore null termination character ~~^~~~~~~~~~~~~~~~~ /mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o microRNA.dll tmp.def longest_common_substring.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/microRNA.buildbin-libdir/00LOCK-microRNA/00new/microRNA/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'microRNA' finding HTML links ... done RNA2DNA html get_selfhyb_subseq html hsSeqs html hsTargets html matchSeeds html mmSeqs html mmTargets html s3utr html seedRegions html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'microRNA' ... ** libs /mingw64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c longest_common_substring.cpp -o longest_common_substring.o longest_common_substring.cpp: In function 'SEXPREC* longest_common_substring(SEXP)': longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare] if (i == len[index] - 1) { // ignore null termination character ~~^~~~~~~~~~~~~~~~~ /mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o microRNA.dll tmp.def longest_common_substring.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/microRNA.buildbin-libdir/microRNA/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'microRNA' as microRNA_1.45.0.zip * DONE (microRNA)