Back to "Blame Jeroen" build/check report for BioC 3.11

INSTALL report for RProtoBufLib on tokay2

This page was generated on 2020-04-15 03:20:15 -0400 (Wed, 15 Apr 2020).

These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html)
TO THE DEVELOPERS/MAINTAINERS OF THE RProtoBufLib PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 72/89HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RProtoBufLib 1.99.7
Mike Jiang
Snapshot Date: 2020-04-14 17:00:05 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/RProtoBufLib
Branch: master
Last Commit: 3c511ad
Last Changed Date: 2020-04-03 18:04:53 -0400 (Fri, 03 Apr 2020)
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK 

Summary

Package: RProtoBufLib
Version: 1.99.7
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/RProtoBufLib_1.99.7.tar.gz && rm -rf RProtoBufLib.buildbin-libdir && mkdir RProtoBufLib.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RProtoBufLib.buildbin-libdir RProtoBufLib_1.99.7.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL RProtoBufLib_1.99.7.zip && rm RProtoBufLib_1.99.7.tar.gz RProtoBufLib_1.99.7.zip
StartedAt: 2020-04-14 17:29:27 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 17:30:04 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 36.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/RProtoBufLib_1.99.7.tar.gz && rm -rf RProtoBufLib.buildbin-libdir && mkdir RProtoBufLib.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RProtoBufLib.buildbin-libdir RProtoBufLib_1.99.7.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL RProtoBufLib_1.99.7.zip && rm RProtoBufLib_1.99.7.tar.gz RProtoBufLib_1.99.7.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2202k  100 2202k    0     0  6857k      0 --:--:-- --:--:-- --:--:-- 7036k

install for i386

* installing *source* package 'RProtoBufLib' ...
** using staged installation

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
mkdir -p "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
cp -r c:/protobuf/include/google "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
mkdir -p "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/i386"
cp  c:/protobuf/lib/i386/libprotobuf-lite.a "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/i386/libprotobuf-lite.a"
/mingw32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c dummy.cpp -o dummy.o
/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RProtoBufLib.dll tmp.def dummy.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RProtoBufLib'
    finding HTML links ... done
    LdFlags                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RProtoBufLib' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
mkdir -p "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/include"
cp -r c:/protobuf/include/google "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/include"
mkdir -p "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/lib/x64"
cp  c:/protobuf/lib/x64/libprotobuf-lite.a "C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/lib/x64/libprotobuf-lite.a"
/mingw64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCTE~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c dummy.cpp -o dummy.o
/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RProtoBufLib.dll tmp.def dummy.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCTE~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/bioctesting/bbs-3.11-bioc-testing/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RProtoBufLib' as RProtoBufLib_1.99.7.zip
* DONE (RProtoBufLib)
* installing to library 'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library'
package 'RProtoBufLib' successfully unpacked and MD5 sums checked