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### Running command:
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###   chmod a+r splicegear -R && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data splicegear
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* checking for file 'splicegear/DESCRIPTION' ... OK
* preparing 'splicegear':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'splicegear.Rnw' using Sweave
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Warning: Package 'splicegear' is deprecated and will be removed from
  Bioconductor version 3.12
Warning in rep(NULL, length = length(entries.i)) :
  'x' is NULL so the result will be NULL
Warning in rep(NULL, length = length(entries.i)) :
  'x' is NULL so the result will be NULL

Error: processing vignette 'splicegear.Rnw' failed with diagnostics:
 chunk 7 
Error in as.data.frame.default(spliceset) : 
  cannot coerce class 'structure("SpliceExprSet", package = "splicegear")' to a data.frame

--- failed re-building 'splicegear.Rnw'

SUMMARY: processing the following file failed:
  'splicegear.Rnw'

Error: Vignette re-building failed.
Execution halted