Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJK[L]MNOPQRSTUVWXYZ

INSTALL report for lol on tokay2

This page was generated on 2020-10-17 11:56:58 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE lol PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 952/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lol 1.36.0
Yinyin Yuan
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/lol
Branch: RELEASE_3_11
Last Commit: 37be877
Last Changed Date: 2020-04-27 14:25:12 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: lol
Version: 1.36.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/lol_1.36.0.tar.gz && rm -rf lol.buildbin-libdir && mkdir lol.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lol.buildbin-libdir lol_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL lol_1.36.0.zip && rm lol_1.36.0.tar.gz lol_1.36.0.zip
StartedAt: 2020-10-16 17:05:37 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:06:39 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 61.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/lol_1.36.0.tar.gz && rm -rf lol.buildbin-libdir && mkdir lol.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lol.buildbin-libdir lol_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL lol_1.36.0.zip && rm lol_1.36.0.tar.gz lol_1.36.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 49700  100 49700    0     0   793k      0 --:--:-- --:--:-- --:--:--  882k

install for i386

* installing *source* package 'lol' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'lol'
    finding HTML links ... done
    chin07                                  html  
    getLambdaNcoef                          html  
    lasso                                   html  
    lasso.cv                                html  
    lasso.multiSplit                        html  
    lasso.simultaneous                      html  
    lasso.stability                         html  
    lmMatrixFit                             html  
    lol-package                             html  
    matrixLasso                             html  
    plotGW                                  html  
    print.lol                               html  
    print.lolMatrix                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'lol' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'lol' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'lol' ...
** testing if installed package can be loaded
Warning: Package 'lol' is deprecated and will be removed from Bioconductor
  version 3.12
* MD5 sums
packaged installation of 'lol' as lol_1.36.0.zip
* DONE (lol)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'lol' successfully unpacked and MD5 sums checked