Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:50 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE iBBiG PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 843/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
iBBiG 1.32.0 Aedin Culhane
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: iBBiG |
Version: 1.32.0 |
Command: rm -rf iBBiG.buildbin-libdir && mkdir iBBiG.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iBBiG.buildbin-libdir iBBiG_1.32.0.tar.gz |
StartedAt: 2020-10-17 10:46:40 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 10:47:39 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 58.9 seconds |
RetCode: 0 |
Status: OK |
PackageFile: iBBiG_1.32.0.zip |
PackageFileSize: 1.103 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf iBBiG.buildbin-libdir && mkdir iBBiG.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iBBiG.buildbin-libdir iBBiG_1.32.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'iBBiG' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_iBBiG.c -o R_init_iBBiG.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c iBBiG.c -o iBBiG.o iBBiG.c: In function 'clusterCovsC': iBBiG.c:300:22: warning: implicit declaration of function 'time' [-Wimplicit-function-declaration] srand((unsigned)time(NULL)); ^~~~ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o iBBiG.dll tmp.def R_init_iBBiG.o iBBiG.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/iBBiG.buildbin-libdir/00LOCK-iBBiG/00new/iBBiG/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'iBBiG' finding HTML links ... done iBBiG-class html finding level-2 HTML links ... done iBBiG-package html Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpIpOc6Z/R.INSTALL1b94283b2301/iBBiG/man/iBBiG-package.Rd:44: file link 'biclust' in package 'biclust' does not exist and so has been treated as a topic iBBiG html makeArtificial html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'iBBiG' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_iBBiG.c -o R_init_iBBiG.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c iBBiG.c -o iBBiG.o iBBiG.c: In function 'clusterCovsC': iBBiG.c:300:22: warning: implicit declaration of function 'time' [-Wimplicit-function-declaration] srand((unsigned)time(NULL)); ^~~~ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o iBBiG.dll tmp.def R_init_iBBiG.o iBBiG.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/iBBiG.buildbin-libdir/iBBiG/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'iBBiG' as iBBiG_1.32.0.zip * DONE (iBBiG)