Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:49 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE hiAnnotator PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 812/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
hiAnnotator 1.22.0 Nirav V Malani
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: hiAnnotator |
Version: 1.22.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/hiAnnotator_1.22.0.tar.gz && rm -rf hiAnnotator.buildbin-libdir && mkdir hiAnnotator.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hiAnnotator.buildbin-libdir hiAnnotator_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL hiAnnotator_1.22.0.zip && rm hiAnnotator_1.22.0.tar.gz hiAnnotator_1.22.0.zip |
StartedAt: 2020-10-16 18:51:19 -0400 (Fri, 16 Oct 2020) |
EndedAt: 2020-10-16 18:52:21 -0400 (Fri, 16 Oct 2020) |
EllapsedTime: 62.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/hiAnnotator_1.22.0.tar.gz && rm -rf hiAnnotator.buildbin-libdir && mkdir hiAnnotator.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hiAnnotator.buildbin-libdir hiAnnotator_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL hiAnnotator_1.22.0.zip && rm hiAnnotator_1.22.0.tar.gz hiAnnotator_1.22.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 794k 100 794k 0 0 11.3M 0 --:--:-- --:--:-- --:--:-- 12.7M install for i386 * installing *source* package 'hiAnnotator' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'hiAnnotator' finding HTML links ... done cleanColname html doAnnotation html dot-checkArgsSetDefaults html dot-mergeAndReturn html genes html get2NearestFeature html getFeatureCounts html getFeatureCountsBig html getLowestDists html Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYRAZty/R.INSTALL265c3e5a50c3/hiAnnotator/man/getLowestDists.Rd:32: file link 'nearest' in package 'IRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYRAZty/R.INSTALL265c3e5a50c3/hiAnnotator/man/getLowestDists.Rd:19: file link 'nearest' in package 'IRanges' does not exist and so has been treated as a topic getNearestFeature html getRelevantCol html getSitesInFeature html Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpYRAZty/R.INSTALL265c3e5a50c3/hiAnnotator/man/getSitesInFeature.Rd:38: file link 'findOverlaps' in package 'IRanges' does not exist and so has been treated as a topic getUCSCtable html finding level-2 HTML links ... done getWindowLabel html hiAnnotator html makeChunks html makeGRanges html makeUCSCsession html plotdisFeature html sites html sites.ctrl html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'hiAnnotator' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'hiAnnotator' as hiAnnotator_1.22.0.zip * DONE (hiAnnotator) * installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library' package 'hiAnnotator' successfully unpacked and MD5 sums checked