Caitlin McHugh
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/cpvSNP |
| Branch: RELEASE_3_11 |
| Last Commit: 0236f6c |
| Last Changed Date: 2020-04-27 14:45:37 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:23 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE cpvSNP PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 388/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| cpvSNP 1.20.0 Caitlin McHugh
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: cpvSNP |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/cpvSNP_1.20.0.tar.gz && rm -rf cpvSNP.buildbin-libdir && mkdir cpvSNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cpvSNP.buildbin-libdir cpvSNP_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL cpvSNP_1.20.0.zip && rm cpvSNP_1.20.0.tar.gz cpvSNP_1.20.0.zip |
| StartedAt: 2020-10-16 19:29:32 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:31:11 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 98.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/cpvSNP_1.20.0.tar.gz && rm -rf cpvSNP.buildbin-libdir && mkdir cpvSNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cpvSNP.buildbin-libdir cpvSNP_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL cpvSNP_1.20.0.zip && rm cpvSNP_1.20.0.tar.gz cpvSNP_1.20.0.zip
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install for i386
* installing *source* package 'cpvSNP' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'cpvSNP'
finding HTML links ... done
GLOSSIResult-class html
GLOSSIResultCollection-class html
GeneSetResult-class html
GeneSetResultCollection-class html
VEGASResult-class html
VEGASResultCollection-class html
assocPvalBySetPlot html
createArrayData html
degreesOfFreedom-method html
exampleArrayData html
geneSetAnalysis html
geneSetName-methods html
geneSets html
geneToSNPList html
glossi html
glossiMarginal html
pValue-method html
plotPvals html
show-methods html
simulate_chisq html
simulatedStats-method html
statistic-methods html
vegas html
vegasMarginal html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'cpvSNP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cpvSNP' as cpvSNP_1.20.0.zip
* DONE (cpvSNP)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'cpvSNP' successfully unpacked and MD5 sums checked