Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:08 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE biobroom PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 150/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
biobroom 1.20.0 John D. Storey
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: biobroom |
Version: 1.20.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/biobroom_1.20.0.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL biobroom_1.20.0.zip && rm biobroom_1.20.0.tar.gz biobroom_1.20.0.zip |
StartedAt: 2020-10-16 17:13:45 -0400 (Fri, 16 Oct 2020) |
EndedAt: 2020-10-16 17:14:12 -0400 (Fri, 16 Oct 2020) |
EllapsedTime: 27.2 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/biobroom_1.20.0.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL biobroom_1.20.0.zip && rm biobroom_1.20.0.tar.gz biobroom_1.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 218k 100 218k 0 0 3535k 0 --:--:-- --:--:-- --:--:-- 4050k install for i386 * installing *source* package 'biobroom' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'biobroom' finding HTML links ... done DESeq2_tidiers html ExpressionSet_tidiers html Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp27Ovyb/R.INSTALL10d849e3efe/biobroom/man/ExpressionSet_tidiers.Rd:17: file link 'assayDataElement' in package 'Biobase' does not exist and so has been treated as a topic GRanges_tidiers html MSnSet_tidiers html SummarizedExperiment_tidiers html biobroom html edgeR_tidiers html edge_tidiers html hammer html limma_tidiers html list_tidiers html qvalue_tidiers html sva_tidiers html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'biobroom' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'biobroom' as biobroom_1.20.0.zip * DONE (biobroom) * installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library' package 'biobroom' successfully unpacked and MD5 sums checked