Tony Chiang
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/ScISI |
| Branch: RELEASE_3_11 |
| Last Commit: 8057b08 |
| Last Changed Date: 2020-04-27 14:12:48 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:45 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE ScISI PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1597/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ScISI 1.60.0 Tony Chiang
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: ScISI |
| Version: 1.60.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ScISI_1.60.0.tar.gz && rm -rf ScISI.buildbin-libdir && mkdir ScISI.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ScISI.buildbin-libdir ScISI_1.60.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ScISI_1.60.0.zip && rm ScISI_1.60.0.tar.gz ScISI_1.60.0.zip |
| StartedAt: 2020-10-16 18:38:11 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:39:19 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 68.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ScISI_1.60.0.tar.gz && rm -rf ScISI.buildbin-libdir && mkdir ScISI.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ScISI.buildbin-libdir ScISI_1.60.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ScISI_1.60.0.zip && rm ScISI_1.60.0.tar.gz ScISI_1.60.0.zip
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install for i386
* installing *source* package 'ScISI' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'Biobase' for request: 'listlen' when loading 'RpsiXML'
No methods found in package 'annotate' for requests: 'pubmed', 'buildPubMedAbst' when loading 'RpsiXML'
** help
*** installing help indices
converting help for package 'ScISI'
finding HTML links ... done
Desc-methods html
ID-methods html
JaccardCoef html
ScISI html
ScISI2html html
arp23 html
arp23G html
arp23Orf html
arp23Y2HG html
calcGraphStats html
cfia html
cfiaOrf html
checkComplex html
checkSGN html
compBijection html
compareComplex html
createGODataFrame html
createGOMatrix html
createMipsDataFrame html
createMipsMatrix html
createYeastDataObj html
dataS html
eAt html
eAt2 html
edgeProp html
egEBI16112 html
expStats html
findSubComp html
gavin2mergeMG html
getAPMSData html
getGOInfo html
getLocOrfs html
getMipsInfo html
getURL-methods html
graphSumStats html
ho2mergeMGG html
krogan2mergeMGGH html
locScISI html
mapping2SysG html
mappingsG html
maximizeSimilarity html
meanDeg html
mergeBGMat html
mips2go html
nAt html
nAtMap html
nonGenes html
nucComp html
recCompSize html
redundantM html
rmByEvi html
runAlignment html
runCompareComplex html
subCompM html
sumStats html
unWantedComp html
unwanted html
xtraGO html
xtraGONodes html
yeastData-class html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'Biobase' for request: 'listlen' when loading 'RpsiXML'
No methods found in package 'annotate' for requests: 'pubmed', 'buildPubMedAbst' when loading 'RpsiXML'
** testing if installed package can be loaded from final location
No methods found in package 'Biobase' for request: 'listlen' when loading 'RpsiXML'
No methods found in package 'annotate' for requests: 'pubmed', 'buildPubMedAbst' when loading 'RpsiXML'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ScISI' ...
** testing if installed package can be loaded
No methods found in package 'Biobase' for request: 'listlen' when loading 'RpsiXML'
No methods found in package 'annotate' for requests: 'pubmed', 'buildPubMedAbst' when loading 'RpsiXML'
* MD5 sums
packaged installation of 'ScISI' as ScISI_1.60.0.zip
* DONE (ScISI)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'ScISI' successfully unpacked and MD5 sums checked