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### Running command:
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###   /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MCRestimate
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* checking for file ‘MCRestimate/DESCRIPTION’ ... OK
* preparing ‘MCRestimate’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘UsingMCRestimate.Rnw’ using Sweave
Loading required package: golubEsets
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Warning: Package 'MCRestimate' is deprecated and will be removed from
  Bioconductor version 3.12

Attaching package: ‘MCRestimate’

The following object is masked from ‘package:base’:

    identity

randomForest 4.6-14
Type rfNews() to see new features/changes/bug fixes.

Attaching package: ‘randomForest’

The following object is masked from ‘package:Biobase’:

    combine

The following object is masked from ‘package:BiocGenerics’:

    combine


Error: processing vignette 'UsingMCRestimate.Rnw' failed with diagnostics:
 chunk 7 (label = RF.make) 
Error in UseMethod("MCRestimate") : 
  no applicable method for 'MCRestimate' applied to an object of class "c('ExpressionSet', 'eSet', 'VersionedBiobase', 'Versioned')"

--- failed re-building ‘UsingMCRestimate.Rnw’

SUMMARY: processing the following file failed:
  ‘UsingMCRestimate.Rnw’

Error: Vignette re-building failed.
Execution halted