Koustav Pal
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/HiCBricks |
| Branch: RELEASE_3_11 |
| Last Commit: 853214f |
| Last Changed Date: 2020-04-27 15:20:41 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:49 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE HiCBricks PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 814/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| HiCBricks 1.6.0 Koustav Pal
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: HiCBricks |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/HiCBricks_1.6.0.tar.gz && rm -rf HiCBricks.buildbin-libdir && mkdir HiCBricks.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiCBricks.buildbin-libdir HiCBricks_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL HiCBricks_1.6.0.zip && rm HiCBricks_1.6.0.tar.gz HiCBricks_1.6.0.zip |
| StartedAt: 2020-10-16 18:23:35 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:24:21 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 46.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/HiCBricks_1.6.0.tar.gz && rm -rf HiCBricks.buildbin-libdir && mkdir HiCBricks.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiCBricks.buildbin-libdir HiCBricks_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL HiCBricks_1.6.0.zip && rm HiCBricks_1.6.0.tar.gz HiCBricks_1.6.0.zip
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install for i386
* installing *source* package 'HiCBricks' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'HiCBricks'
finding HTML links ... done
BrickContainer_change_experiment_name html
BrickContainer_change_output_directory
html
BrickContainer_get_path_to_file html
BrickContainer_list_chromosomes html
BrickContainer_list_experiment_name html
BrickContainer_list_files html
BrickContainer_list_output_directory html
BrickContainer_list_resolutions html
BrickContainer_unlink_resolution html
Brick_add_ranges html
Brick_call_compartments html
Brick_export_to_sparse html
Brick_fetch_range_index html
Brick_fetch_row_vector html
Brick_get_bintable html
Brick_get_chrominfo html
Brick_get_entire_matrix html
Brick_get_matrix html
Brick_get_matrix_mcols html
Brick_get_matrix_within_coords html
Brick_get_ranges html
Brick_get_values_by_distance html
Brick_get_vector_values html
Brick_list_matrices html
Brick_list_matrix_mcols html
Brick_list_mcool_normalisations html
Brick_list_mcool_resolutions html
Brick_list_rangekeys html
Brick_list_ranges_mcols html
Brick_load_cis_matrix_till_distance html
Brick_load_data_from_mcool html
Brick_load_data_from_sparse html
Brick_load_matrix html
Brick_local_score_differentiator html
Brick_make_ranges html
Brick_matrix_dimensions html
Brick_matrix_exists html
Brick_matrix_filename html
Brick_matrix_isdone html
Brick_matrix_issparse html
Brick_matrix_maxdist html
Brick_matrix_minmax html
Brick_mcool_normalisation_exists html
Brick_rangekey_exists html
Brick_return_region_position html
Brick_vizart_plot_heatmap html
Create_many_Bricks html
Create_many_Bricks_from_mcool html
HiCBricks html
load_BrickContainer html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'HiCBricks' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HiCBricks' as HiCBricks_1.6.0.zip
* DONE (HiCBricks)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'HiCBricks' successfully unpacked and MD5 sums checked