Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:54:52 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE GEWIST PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 726/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
GEWIST 1.32.0 Wei Q. Deng
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | [ OK ] | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: GEWIST |
Version: 1.32.0 |
Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD check --install=check:GEWIST.install-out.txt --library=/home/biocbuild/bbs-3.11-bioc/R/library --no-vignettes --timings GEWIST_1.32.0.tar.gz |
StartedAt: 2020-10-17 01:47:14 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 01:48:03 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 49.2 seconds |
RetCode: 0 |
Status: OK |
CheckDir: GEWIST.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD check --install=check:GEWIST.install-out.txt --library=/home/biocbuild/bbs-3.11-bioc/R/library --no-vignettes --timings GEWIST_1.32.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.11-bioc/meat/GEWIST.Rcheck’ * using R version 4.0.3 (2020-10-10) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘GEWIST/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘GEWIST’ version ‘1.32.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘GEWIST’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... NOTE Package in Depends field not imported from: ‘car’ These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE effectPDF: no visible global function definition for ‘dnorm’ effectPDF: no visible global function definition for ‘dbeta’ effectPDF: no visible global function definition for ‘dunif’ effectPDF: no visible global function definition for ‘dweibull’ gewistLevene: no visible global function definition for ‘rchisq’ gewistLevene: no visible global function definition for ‘rnorm’ gewistLevene: no visible global function definition for ‘pf’ Undefined global functions or variables: dbeta dnorm dunif dweibull pf rchisq rnorm Consider adding importFrom("stats", "dbeta", "dnorm", "dunif", "dweibull", "pf", "rchisq", "rnorm") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed effectPDF 21.143 0.039 21.183 * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/home/biocbuild/bbs-3.11-bioc/meat/GEWIST.Rcheck/00check.log’ for details.
GEWIST.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL GEWIST ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’ * installing *source* package ‘GEWIST’ ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GEWIST)
GEWIST.Rcheck/GEWIST-Ex.timings
name | user | system | elapsed | |
effectPDF | 21.143 | 0.039 | 21.183 | |
gewistLevene | 0.395 | 0.008 | 0.403 | |