Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:58:28 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE FEM PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 593/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Zhen Yang
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | [ OK ] |
Package: FEM |
Version: 3.16.0 |
Command: rm -rf FEM.buildbin-libdir && mkdir FEM.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FEM_3.16.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FEM.buildbin-libdir |
StartedAt: 2020-10-17 07:03:36 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 07:04:04 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 28.5 seconds |
RetCode: 0 |
Status: OK |
PackageFile: FEM_3.16.0.tgz |
PackageFileSize: 13.68 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf FEM.buildbin-libdir && mkdir FEM.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FEM_3.16.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FEM.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=FEM.buildbin-libdir FEM_3.16.0.tar.gz' >>>>>>> * installing *source* package ‘FEM’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import ‘igraph::edges’ by ‘graph::edges’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::intersection’ by ‘graph::intersection’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::degree’ by ‘graph::degree’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::union’ by ‘graph::union’ when loading ‘FEM’ Warning: replacing previous import ‘limma::plotMA’ by ‘BiocGenerics::plotMA’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::path’ by ‘BiocGenerics::path’ when loading ‘FEM’ Warning: replacing previous import ‘Matrix::which’ by ‘BiocGenerics::which’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::normalize’ by ‘BiocGenerics::normalize’ when loading ‘FEM’ Note: break used in wrong context: no loop is visible Note: break used in wrong context: no loop is visible Note: break used in wrong context: no loop is visible Note: break used in wrong context: no loop is visible Note: break used in wrong context: no loop is visible Note: break used in wrong context: no loop is visible Note: break used in wrong context: no loop is visible Note: break used in wrong context: no loop is visible ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import ‘igraph::edges’ by ‘graph::edges’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::intersection’ by ‘graph::intersection’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::degree’ by ‘graph::degree’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::union’ by ‘graph::union’ when loading ‘FEM’ Warning: replacing previous import ‘limma::plotMA’ by ‘BiocGenerics::plotMA’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::path’ by ‘BiocGenerics::path’ when loading ‘FEM’ Warning: replacing previous import ‘Matrix::which’ by ‘BiocGenerics::which’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::normalize’ by ‘BiocGenerics::normalize’ when loading ‘FEM’ Warning: Package 'FEM' is deprecated and will be removed from Bioconductor version 3.12 ** testing if installed package can be loaded from final location Warning: replacing previous import ‘igraph::edges’ by ‘graph::edges’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::intersection’ by ‘graph::intersection’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::degree’ by ‘graph::degree’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::union’ by ‘graph::union’ when loading ‘FEM’ Warning: replacing previous import ‘limma::plotMA’ by ‘BiocGenerics::plotMA’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::path’ by ‘BiocGenerics::path’ when loading ‘FEM’ Warning: replacing previous import ‘Matrix::which’ by ‘BiocGenerics::which’ when loading ‘FEM’ Warning: replacing previous import ‘igraph::normalize’ by ‘BiocGenerics::normalize’ when loading ‘FEM’ Warning: Package 'FEM' is deprecated and will be removed from Bioconductor version 3.12 ** testing if installed package keeps a record of temporary installation path * DONE (FEM)