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BUILD BIN report for EDDA on tokay2

This page was generated on 2020-10-17 11:56:30 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE EDDA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 527/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDDA 1.26.0
Chia Kuan Hui Burton , Niranjan Nagarajan
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/EDDA
Branch: RELEASE_3_11
Last Commit: 4555ef4
Last Changed Date: 2020-04-27 14:38:40 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: EDDA
Version: 1.26.0
Command: rm -rf EDDA.buildbin-libdir && mkdir EDDA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDDA.buildbin-libdir EDDA_1.26.0.tar.gz
StartedAt: 2020-10-17 10:24:15 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 10:25:20 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 64.7 seconds
RetCode: 0
Status:  OK  
PackageFile: EDDA_1.26.0.zip
PackageFileSize: 2.715 MiB

Command output

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### Running command:
###
###   rm -rf EDDA.buildbin-libdir && mkdir EDDA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDDA.buildbin-libdir EDDA_1.26.0.tar.gz
###
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install for i386

* installing *source* package 'EDDA' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c cuffdiff.cpp -o cuffdiff.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o EDDA.dll tmp.def cuffdiff.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/EDDA.buildbin-libdir/00LOCK-EDDA/00new/EDDA/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning message:
Package 'DESeq' is deprecated and will be removed from Bioconductor
  version 3.13. Please use DESeq2 
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
Note: possible error in 'exactTestByDeviance(y1, ': unused argument (big.count = big.count) 
Note: possible error in 'exactTestBySmallP(y1, ': unused argument (big.count = big.count) 
** help
*** installing help indices
  converting help for package 'EDDA'
    finding HTML links ... done
    BP                                      html  
    EDDA-package                            html  
    HBR                                     html  
    SingleCell                              html  
    Wu                                      html  
    computeAUC                              html  
    generateData                            html  
    plotPRC                                 html  
    plotROC                                 html  
    testDATs                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'DESeq' is deprecated and will be removed from Bioconductor
  version 3.13. Please use DESeq2
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
** testing if installed package can be loaded from final location
Warning: Package 'DESeq' is deprecated and will be removed from Bioconductor
  version 3.13. Please use DESeq2
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'EDDA' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c cuffdiff.cpp -o cuffdiff.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o EDDA.dll tmp.def cuffdiff.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/EDDA.buildbin-libdir/EDDA/libs/x64
** testing if installed package can be loaded
Warning: Package 'DESeq' is deprecated and will be removed from Bioconductor
  version 3.13. Please use DESeq2
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
* MD5 sums
packaged installation of 'EDDA' as EDDA_1.26.0.zip
* DONE (EDDA)