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INSTALL report for CSSQ on tokay2

This page was generated on 2020-10-17 11:56:23 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE CSSQ PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 400/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CSSQ 1.0.5
Fan Lab at Georgia Institute of Technology
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/CSSQ
Branch: RELEASE_3_11
Last Commit: 3a1b517
Last Changed Date: 2020-06-02 18:04:04 -0400 (Tue, 02 Jun 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CSSQ
Version: 1.0.5
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CSSQ_1.0.5.tar.gz && rm -rf CSSQ.buildbin-libdir && mkdir CSSQ.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CSSQ.buildbin-libdir CSSQ_1.0.5.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CSSQ_1.0.5.zip && rm CSSQ_1.0.5.tar.gz CSSQ_1.0.5.zip
StartedAt: 2020-10-16 19:24:08 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:25:32 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 84.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CSSQ_1.0.5.tar.gz && rm -rf CSSQ.buildbin-libdir && mkdir CSSQ.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CSSQ.buildbin-libdir CSSQ_1.0.5.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CSSQ_1.0.5.zip && rm CSSQ_1.0.5.tar.gz CSSQ_1.0.5.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  855k  100  855k    0     0  13.3M      0 --:--:-- --:--:-- --:--:-- 14.9M

install for i386

* installing *source* package 'CSSQ' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CSSQ'
    finding HTML links ... done
    DBAnalyze                               html  
    ansTransform                            html  
    calculateFC                             html  
    calculatePvalue                         html  
    calculateTvalue                         html  
    getBgSubVal                             html  
    getComparisons                          html  
    getNewLabels                            html  
    getRegionCounts                         html  
    kmeansNormalize                         html  
    loadCountData                           html  
    normalizeData                           html  
    plotDist                                html  
    preprocessData                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CSSQ' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CSSQ' as CSSQ_1.0.5.zip
* DONE (CSSQ)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'CSSQ' successfully unpacked and MD5 sums checked