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### Running command:
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### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL BAGS
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* installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’
* installing *source* package ‘BAGS’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c BAGS.c -o BAGS.o
In file included from BAGS.c:8:0:
FuncionesFast-Final.h: In function ‘BetaFunCSDiff2’:
FuncionesFast-Final.h:145:70: warning: unused variable ‘YMu1’ [-Wunused-variable]
double media1,media,varianza1,varianza,resultado,varaux0,varaux1,YMu1;
^~~~
FuncionesFast-Final.h: In function ‘AlfaFunCS’:
FuncionesFast-Final.h:166:105: warning: unused variable ‘MediaDiff’ [-Wunused-variable]
double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff;
^~~~~~~~~
FuncionesFast-Final.h:166:94: warning: unused variable ‘A’ [-Wunused-variable]
double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff;
^
FuncionesFast-Final.h:166:92: warning: unused variable ‘C’ [-Wunused-variable]
double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff;
^
BAGS.c: In function ‘Gibbs5’:
BAGS.c:25:48: warning: unused variable ‘resI’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI;
^~~~
BAGS.c:25:43: warning: unused variable ‘rate’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI;
^~~~
BAGS.c:25:36: warning: unused variable ‘escala’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI;
^~~~~~
BAGS.c:25:28: warning: unused variable ‘escala3’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI;
^~~~~~~
BAGS.c:25:20: warning: unused variable ‘escala2’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI;
^~~~~~~
BAGS.c:25:12: warning: unused variable ‘escala1’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI;
^~~~~~~
BAGS.c:24:12: warning: unused variable ‘formaAux’ [-Wunused-variable]
double formaAux;
^~~~~~~~
BAGS.c:18:80: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable]
double ResRho1,ResRho2,ResRho3,ResRho4,ResSgmA1,ResSgmA2,ResSgmA3,ResSgmA4,ResSgmA;
^~~~~~~
BAGS.c:15:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable]
double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
^~~~
BAGS.c: In function ‘Gibbs4’:
BAGS.c:342:48: warning: unused variable ‘resI’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~
BAGS.c:342:43: warning: unused variable ‘rate’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~
BAGS.c:342:36: warning: unused variable ‘escala’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~
BAGS.c:342:28: warning: unused variable ‘escala3’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:342:20: warning: unused variable ‘escala2’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:342:12: warning: unused variable ‘escala1’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:341:12: warning: unused variable ‘formaAux’ [-Wunused-variable]
double formaAux;
^~~~~~~~
BAGS.c:335:63: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable]
double ResRho1,ResRho2,ResRho3,ResSgmA1,ResSgmA2,ResSgmA3,ResSgmA;
^~~~~~~
BAGS.c:332:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable]
double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
^~~~
BAGS.c: In function ‘Gibbs3’:
BAGS.c:593:48: warning: unused variable ‘resI’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~
BAGS.c:593:43: warning: unused variable ‘rate’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~
BAGS.c:593:36: warning: unused variable ‘escala’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~
BAGS.c:593:28: warning: unused variable ‘escala3’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:593:20: warning: unused variable ‘escala2’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:593:12: warning: unused variable ‘escala1’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:592:12: warning: unused variable ‘formaAux’ [-Wunused-variable]
double formaAux;
^~~~~~~~
BAGS.c:586:46: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable]
double ResRho1,ResRho2,ResSgmA1,ResSgmA2,ResSgmA;
^~~~~~~
BAGS.c:583:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable]
double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
^~~~
BAGS.c: In function ‘Gibbs2’:
BAGS.c:786:48: warning: unused variable ‘resI’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~
BAGS.c:786:43: warning: unused variable ‘rate’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~
BAGS.c:786:36: warning: unused variable ‘escala’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~
BAGS.c:786:28: warning: unused variable ‘escala3’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:786:20: warning: unused variable ‘escala2’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:786:12: warning: unused variable ‘escala1’ [-Wunused-variable]
double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
^~~~~~~
BAGS.c:785:12: warning: unused variable ‘formaAux’ [-Wunused-variable]
double formaAux;
^~~~~~~~
BAGS.c:779:29: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable]
double ResRho1,ResSgmA1,ResSgmA;
^~~~~~~
BAGS.c:776:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable]
double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
^~~~
gcc -shared -L/home/biocbuild/bbs-3.11-bioc/R/lib -L/usr/local/lib -o BAGS.so BAGS.o -L/home/biocbuild/bbs-3.11-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.11-bioc/R/library/00LOCK-BAGS/00new/BAGS/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BAGS)
