Package: ind1KG

Version: 0.1.8

Command: D:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch ind1KG_0.1.8.tar.gz

StartedAt: 2011-10-01 03:07:22 -0700 (Sat, 01 Oct 2011)

EndedAt: 2011-10-01 03:11:23 -0700 (Sat, 01 Oct 2011)

EllapsedTime: 241.0 seconds

RetCode: 0

Status:  OK

CheckDir: ind1KG.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.8-data-experiment/meat/ind1KG.Rcheck'
* using R version 2.13.1 (2011-07-08)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ind1KG/DESCRIPTION' ... OK
* this is package 'ind1KG' version '0.1.8'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ind1KG' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 182.5Mb
  sub-directories of 1Mb or more:
    data     149.8Mb
    doc        2.1Mb
    pileups   30.5Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'ind1KG' ...
** data
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (ind1KG)

name	user	system	elapsed
c6snp	16.39	0.13	18.31
gw6c6.snp240	0.17	0.01	0.25
n240	27.61	0.47	31.01
oregdf	0.02	0.00	0.02
pup240_500k	2.61	0.07	2.75
pup240_disc	0.07	0.00	0.08
rsgdf	0.02	0.00	0.01
yri240_6	0.56	0.01	0.58