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Package 255/467HostnameOS / ArchBUILDCHECKBUILD BIN
logitT 1.10.0
Tobias Guennel
Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/logitT
Last Changed Rev: 54800 / Revision: 59457
Last Changed Date: 2011-04-13 15:27:35 -0700 (Wed, 13 Apr 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]

Summary

Package: logitT
Version: 1.10.0
Command: rm -rf logitT.buildbin-libdir && mkdir logitT.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh logitT_1.10.0.tar.gz /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R logitT.buildbin-libdir
StartedAt: 2011-10-20 18:18:19 -0700 (Thu, 20 Oct 2011)
EndedAt: 2011-10-20 18:18:24 -0700 (Thu, 20 Oct 2011)
EllapsedTime: 5.9 seconds
RetCode: 0
Status:  OK 
PackageFile: logitT_1.10.0.tgz
PackageFileSize: 190.3 KiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=logitT.buildbin-libdir logitT_1.10.0.tar.gz'
>>>>>>> 

* installing *source* package 'logitT' ...
** libs
*** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c logitTfunc.c -o logitTfunc.o
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o logitT.so logitTfunc.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/logitT.buildbin-libdir/logitT/libs/i386
*** arch - ppc
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c logitTfunc.c -o logitTfunc.o
gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o logitT.so logitTfunc.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/logitT.buildbin-libdir/logitT/libs/ppc
*** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c logitTfunc.c -o logitTfunc.o
gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o logitT.so logitTfunc.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/logitT.buildbin-libdir/logitT/libs/x86_64
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (logitT)


>>>>>>> 
>>>>>>> FIXING LINKS FOR logitT.buildbin-libdir/logitT/libs/i386/logitT.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "logitT.buildbin-libdir/logitT/libs/i386/logitT.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "logitT.buildbin-libdir/logitT/libs/i386/logitT.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "logitT.buildbin-libdir/logitT/libs/i386/logitT.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "logitT.buildbin-libdir/logitT/libs/i386/logitT.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR logitT.buildbin-libdir/logitT/libs/ppc/logitT.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "logitT.buildbin-libdir/logitT/libs/ppc/logitT.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "logitT.buildbin-libdir/logitT/libs/ppc/logitT.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "logitT.buildbin-libdir/logitT/libs/ppc/logitT.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "logitT.buildbin-libdir/logitT/libs/ppc/logitT.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR logitT.buildbin-libdir/logitT/libs/x86_64/logitT.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "logitT.buildbin-libdir/logitT/libs/x86_64/logitT.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "logitT.buildbin-libdir/logitT/libs/x86_64/logitT.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "logitT.buildbin-libdir/logitT/libs/x86_64/logitT.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "logitT.buildbin-libdir/logitT/libs/x86_64/logitT.so"