ABarray 1.12.0
Yongming Andrew Sun
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/ABarray | | Last Changed Rev: 39013 / Revision: 42512 | | Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.4-bioc/meat/ABarray.Rcheck'
* using R version 2.9.2 (2009-08-24)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ABarray/DESCRIPTION' ... OK
* this is package 'ABarray' version '1.12.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ABarray' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
ABarray: no visible binding for global variable 'colSn'
ABarrayGUI : getImputeFunc: no visible binding for global variable
'knnRbtn'
getPantherMap: no visible binding for global variable 'panther'
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK
* Installing *source* package 'ABarray' ...
** R
** inst
** preparing package for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading Tcl/Tk interface ... done
** help
*** installing help indices
>>> Building/Updating help pages for package 'ABarray'
Formats: text html latex example chm
ABarray text html latex example chm
Note: removing empty section \arguments in file 'ABarrayGUI.Rd'
Note: removing empty section \arguments in file 'ABarrayGUI.Rd'
ABarrayGUI text html latex example chm
Note: removing empty section \examples in file 'calcsn.Rd'
Note: removing empty section \examples in file 'calcsn.Rd'
calcsn text html latex chm
concord text html latex example chm
Note: removing empty section \examples in file 'cvv.Rd'
Note: removing empty section \examples in file 'cvv.Rd'
cvv text html latex chm
Note: removing empty section \examples in file 'cvvPlot.Rd'
Note: removing empty section \examples in file 'cvvPlot.Rd'
cvvPlot text html latex chm
doANOVA text html latex example chm
doLPE text html latex example chm
doPlotEset text html latex example chm
doPlotFCT text html latex example chm
Note: removing empty section \examples in file 'doVennDiagram.Rd'
Note: removing empty section \examples in file 'doVennDiagram.Rd'
doVennDiagram text html latex chm
drawVennDiagram text html latex example chm
Note: removing empty section \examples in file 'getMemberEset.Rd'
Note: removing empty section \examples in file 'getMemberEset.Rd'
getMemberEset text html latex chm
Note: removing empty section \examples in file 'getPantherMap.Rd'
Note: removing empty section \examples in file 'getPantherMap.Rd'
getPantherMap text html latex chm
Note: removing empty section \examples in file 'hclusterPlot.Rd'
Note: removing empty section \examples in file 'hclusterPlot.Rd'
hclusterPlot text html latex chm
icpPlot text html latex example chm
imputeFlag text html latex example chm
lpe.fdr.BH text html latex example chm
mamaplot text html latex example chm
Note: removing empty section \examples in file 'matrixPlot.Rd'
Note: removing empty section \examples in file 'matrixPlot.Rd'
matrixPlot text html latex chm
mvaPair2 text html latex example chm
panel.cor text html latex example chm
panel.scatter text html latex example chm
Note: removing empty section \examples in file 'qnNormalize.Rd'
Note: removing empty section \examples in file 'qnNormalize.Rd'
qnNormalize text html latex chm
rgcolorsfunc text html latex example chm
Note: removing empty section \examples in file 'savejpg.Rd'
Note: removing empty section \examples in file 'savejpg.Rd'
savejpg text html latex chm
scaleColorBar text html latex example chm
Note: removing empty section \examples in file 'snSummary.Rd'
Note: removing empty section \examples in file 'snSummary.Rd'
snSummary text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\BBS-2~1.4-B\meat\ABARRA~1.RCH\00_PKG~1\ABarray\chm\ABarray.chm
Compile time: 0 minutes, 1 second
29 Topics
58 Local links
0 Internet links
1 Graphic
Created e:\biocbld\BBS-2~1.4-B\meat\ABARRA~1.RCH\00_PKG~1\ABarray\chm\ABarray.chm, 40,088 bytes
Compression decreased file by 33,046 bytes.
** building package indices ...
** MD5 sums
* DONE (ABarray)