Package: vbmp

Version: 1.10.0

Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD check --no-vignettes vbmp_1.10.0.tar.gz

StartedAt: 2009-04-18 18:11:43 -0700 (Sat, 18 Apr 2009)

EndedAt: 2009-04-18 18:12:09 -0700 (Sat, 18 Apr 2009)

EllapsedTime: 25.8 seconds

RetCode: 0

Status: OK

CheckDir: vbmp.Rcheck

Warnings: 0

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.3-bioc/meat/vbmp.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ASCII
* checking for file 'vbmp/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'vbmp' version '1.10.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'vbmp' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating vbmp-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating vbmp-manual.tex ... OK
* checking vbmp-manual.tex using pdflatex ... OK

* Installing *source* package 'vbmp' ...
** R
** data
** inst
** preparing package for lazy loading
** help
 >>> Building/Updating help pages for package 'vbmp'
     Formats: text html latex example 
  BRCA12                            text    html    latex
  covParams                         text    html    latex
  lowerBound                        text    html    latex
  plotDiagnostics                   text    html    latex
  predClass                         text    html    latex
  predError                         text    html    latex
  predLik                           text    html    latex
  predictCPP                        text    html    latex
  vbmp                              text    html    latex   example
** building package indices ...
* DONE (vbmp)