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Package 206/294HostnameOS / ArchBUILDCHECKBUILD BIN
pdmclass 1.14.0
James W. MacDonald
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/pdmclass
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK [ OK ] OK 
Package: pdmclass
Version: 1.14.0
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD check --no-vignettes pdmclass_1.14.0.tar.gz
StartedAt: 2009-04-18 18:05:30 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 18:07:05 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 94.1 seconds
RetCode: 0
Status: OK
CheckDir: pdmclass.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.3-bioc/meat/pdmclass.Rcheck'
* using R version 2.8.1 Patched (2009-03-18 r48200)
* using session charset: ASCII
* checking for file 'pdmclass/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'pdmclass' version '1.14.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pdmclass' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating pdmclass-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating pdmclass-manual.tex ... OK
* checking pdmclass-manual.tex using pdflatex ... OK

pdmclass.Rcheck/00install.out:

* Installing *source* package 'pdmclass' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: fibroEset
Loading required package: mda
Loading required package: class
** help
 >>> Building/Updating help pages for package 'pdmclass'
     Formats: text html latex example 
  my.svd                            text    html    latex
  pdmClass                          text    html    latex   example
  pdmClass.cv                       text    html    latex   example
  pdmGenes                          text    html    latex   example
  pls1c                             text    html    latex
  predict.pls                       text    html    latex   example
  svdpls1c                          text    html    latex
  svdr                              text    html    latex
** building package indices ...
* DONE (pdmclass)