makecdfenv 1.20.0
James W. MacDonald
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/makecdfenv | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/makecdfenv.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'makecdfenv/DESCRIPTION' ... OK
* this is package 'makecdfenv' version '1.20.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'makecdfenv' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating makecdfenv-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating makecdfenv-manual.tex ... OK
* checking makecdfenv-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/makecdfenv.Rcheck
---------- Making package makecdfenv ------------
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making read_cdffile.d from read_cdffile.c
gcc -std=gnu99 -DHAVE_ZLIB -Ie:/biocbld/bbs-2.3-bioc/R/include -O3 -Wall -c read_cdffile.c -o read_cdffile.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include -i makecdfenv_res.rc -o makecdfenv_res.o
gcc -std=gnu99 -shared -s -o makecdfenv.dll makecdfenv.def read_cdffile.o makecdfenv_res.o -Le:/biocbld/bbs-2.3-bioc/R/bin -lRzlib -lR
... DLL made
installing DLL
installing R files
installing inst files
preparing package makecdfenv for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affy
Loading required package: affyio
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'makecdfenv'
Formats: text html latex example chm
Cdf-class text html latex chm
getInfoInAffyFile text html latex chm
make.cdf.env text html latex example chm
make.cdf.package text html latex example chm
pmormm text html latex chm
read.cdffile text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\makecdfenv.Rcheck\00_pkg_src\makecdfenv\chm\makecdfenv.chm
Compile time: 0 minutes, 1 second
7 Topics
42 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\makecdfenv.Rcheck\00_pkg_src\makecdfenv\chm\makecdfenv.chm, 26,841 bytes
Compression decreased file by 7,502 bytes.
adding MD5 sums
* DONE (makecdfenv)