geneplotter 1.20.0
Biocore Team c/o BioC user list
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/geneplotter | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/geneplotter.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'geneplotter/DESCRIPTION' ... OK
* this is package 'geneplotter' version '1.20.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'geneplotter' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating geneplotter-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating geneplotter-manual.tex ... OK
* checking geneplotter-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/geneplotter.Rcheck
---------- Making package geneplotter ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
preparing package geneplotter for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: lattice
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: xtable
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'geneplotter'
Formats: text html latex example chm
GetColor text html latex example chm
Makesense text html latex example chm
alongChrom text html latex example chm
amplicon.plot text html latex example chm
cColor text html latex example chm
cPlot text html latex example chm
cScale text html latex example chm
classes text html latex chm
eset133a text html latex example chm
groupedHeatmap text html latex example chm
histStack text html latex example chm
imageMap text html latex example chm
make.chromOrd text html latex example chm
multiecdf text html latex example chm
Note: removing empty section \seealso in file 'openHtmlPage.Rd'
Note: removing empty section \seealso in file 'openHtmlPage.Rd'
openHtmlPage text html latex example chm
panel.smoothScatter text html latex example chm
plotChr text html latex example chm
plotExpressionGraph text html latex example chm
savepng text html latex example chm
smoothscatter text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\geneplotter.Rcheck\00_pkg_src\geneplotter\chm\geneplotter.chm
Compile time: 0 minutes, 0 seconds
21 Topics
89 Local links
6 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\geneplotter.Rcheck\00_pkg_src\geneplotter\chm\geneplotter.chm, 56,350 bytes
Compression decreased file by 49,011 bytes.
adding MD5 sums
* DONE (geneplotter)