exonmap 2.0.03
Crispin Miller
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/exonmap | | Last Changed Rev: 35851 / Revision: 38965 | | Last Changed Date: 2008-12-11 00:31:07 -0800 (Thu, 11 Dec 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | [ OK ] | OK |
* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.3-bioc/meat/exonmap.Rcheck'
* using R version 2.8.1 Patched (2009-03-18 r48200)
* using session charset: ASCII
* checking for file 'exonmap/DESCRIPTION' ... OK
* this is package 'exonmap' version '2.0.03'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'exonmap' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating exonmap-Ex.R ... OK
* checking examples ... OK
* creating exonmap-manual.tex ... OK
* checking exonmap-manual.tex using pdflatex ... OK
* Installing *source* package 'exonmap' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: RColorBrewer
Loading required package: RMySQL
Loading required package: DBI
** help
>>> Building/Updating help pages for package 'exonmap'
Formats: text html latex example
PC-class text html latex example
array.subset text html latex example
db.local.info text html latex example
details text html latex example
filters text html latex example
gene.graph text html latex example
gene.legend text html latex example
gene.strip text html latex example
group.indices text html latex example
mappings text html latex example
pc text html latex example
plotGene text html latex example
probes.in.range text html latex example
probeset.stats text html latex example
read.exon text html latex example
si text html latex example
x.rma text html latex
xmapConnect text html latex example
xmapGene text html latex example
** building package indices ...
* DONE (exonmap)