RpsiXML 1.0.0
Jitao David Zhang
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/RpsiXML | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | [ OK ] | OK | OK |
* checking for file 'RpsiXML/DESCRIPTION' ... OK
* preparing 'RpsiXML':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'RpsiXML' ...
** R
** inst
** preparing package for lazy loading
Loading required package: annotate
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: AnnotationDbi
Loading required package: xtable
Loading required package: XML
Loading required package: graph
Attaching package: 'graph'
The following object(s) are masked from package:XML :
addNode
Loading required package: hypergraph
Attaching package: 'hypergraph'
The following object(s) are masked from package:xtable :
label,
label<-
The following object(s) are masked from package:AnnotationDbi :
head,
tail
The following object(s) are masked from package:utils :
head,
tail
Loading required package: RBGL
** help
>>> Building/Updating help pages for package 'RpsiXML'
Formats: text html latex example
BIOGRID.PSIMI25 text html latex
availableXrefs-methods text html latex
availableXrefs text html latex example
bait text html latex example
complexName text html latex example
complexes text html latex example
eListHandler text html latex example
getAbstractByPMID text html latex example
interactionType text html latex example
interactions text html latex example
interactorInfo-methods text html latex
interactorInfo text html latex example
interactors-methods text html latex
interactors text html latex example
list2Matrix text html latex
null2na text html latex example
organismName text html latex example
parseComplex text html latex
parsePsimi25Interaction text html latex example
psimi25Complex-class text html latex example
psimi25ComplexEntry-class text html latex example
psimi25Experiment-class text html latex example
psimi25Graph-class text html latex example
psimi25Hypergraph-class text html latex example
psimi25Interaction-class text html latex example
psimi25InteractionEntry-class text html latex example
psimi25Interactor-class text html latex example
psimi25Source-class text html latex example
psimi25XML2Graph text html latex example
releaseDate text html latex example
separateXMLDataByExpt text html latex example
sourceDb-methods text html latex
sourceDb text html latex
sourceId-methods text html latex
sourceId text html latex
taxId-methods text html latex
taxId text html latex example
translateID-methods text html latex
translateID text html latex example
uniprot-methods text html latex
uniprot text html latex example
validatePSIMI25 text html latex example
** building package indices ...
* DONE (RpsiXML)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'RpsiXML_1.0.0.tar.gz'