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Package 130/294HostnameOS / ArchBUILDCHECKBUILD BIN
HELP 1.0.0
Reid F. Thompson
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/HELP
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: HELP
Version: 1.0.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes HELP_1.0.0.tar.gz
StartedAt: 2009-04-18 19:03:18 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 19:04:06 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 47.6 seconds
RetCode: 0
Status: OK
CheckDir: HELP.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/HELP.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'HELP/DESCRIPTION' ... OK
* this is package 'HELP' version '1.0.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'HELP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating HELP-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating HELP-manual.tex ... OK
* checking HELP-manual.tex using pdflatex ... OK

HELP.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-bioc/meat/HELP.Rcheck


---------- Making package HELP ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing demos
  installing inst files
  installing data files
  preparing package HELP for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'HELP'
     Formats: text html latex example chm 
  base.stacking.thermodynamics      text    html    latex   example chm
  calcGC-methods                    text    html    latex           chm
  calcGC                            text    html    latex   example chm
  calcPrototype-methods             text    html    latex           chm
  calcPrototype                     text    html    latex   example chm
  calcTm-methods                    text    html    latex           chm
  calcTm                            text    html    latex   example chm
  combineData-methods               text    html    latex           chm
  combineData                       text    html    latex   example chm
  createWiggle-methods              text    html    latex           chm
  createWiggle                      text    html    latex   example chm
  exprs2-methods                    text    html    latex           chm
  exprs2                            text    html    latex   example chm
  fuzzyMatches-methods              text    html    latex           chm
  fuzzyMatches                      text    html    latex   example chm
  getFeatures-methods               text    html    latex           chm
  getFeatures                       text    html    latex   example chm
  getSamples-methods                text    html    latex           chm
  getSamples                        text    html    latex   example chm
  plotBins-methods                  text    html    latex           chm
  plotBins                          text    html    latex   example chm
  plotChip-methods                  text    html    latex           chm
  plotChip                          text    html    latex   example chm
  plotFeature-methods               text    html    latex           chm
  plotFeature                       text    html    latex   example chm
  plotPairs-methods                 text    html    latex           chm
  plotPairs                         text    html    latex   example chm
  quantileNormalize-methods         text    html    latex           chm
  quantileNormalize                 text    html    latex   example chm
  readDesign-methods                text    html    latex           chm
  readDesign                        text    html    latex   example chm
  readPairs-methods                 text    html    latex           chm
  readPairs                         text    html    latex   example chm
  readSampleKey                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-bioc\meat\HELP.Rcheck\00_pkg_src\HELP\chm\HELP.chm


Compile time: 0 minutes, 0 seconds
35	Topics
215	Local links
1	Internet link
1	Graphic


Created e:\biocbld\bbs-2.3-bioc\meat\HELP.Rcheck\00_pkg_src\HELP\chm\HELP.chm, 57,247 bytes
Compression decreased file by 108,860 bytes.
  adding MD5 sums

* DONE (HELP)