ABarray 1.10.0
Yongming Andrew Sun
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/ABarray | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | [ OK ] | OK |
* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.3-bioc/meat/ABarray.Rcheck'
* using R version 2.8.1 Patched (2009-03-18 r48200)
* using session charset: ASCII
* checking for file 'ABarray/DESCRIPTION' ... OK
* this is package 'ABarray' version '1.10.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ABarray' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
ABarray: no visible binding for global variable 'colSn'
ABarrayGUI : getImputeFunc: no visible binding for global variable
'knnRbtn'
getPantherMap: no visible binding for global variable 'panther'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating ABarray-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating ABarray-manual.tex ... OK
* checking ABarray-manual.tex using pdflatex ... OK
* Installing *source* package 'ABarray' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: multtest
Loading required package: tcltk
Loading Tcl/Tk interface ... done
** help
>>> Building/Updating help pages for package 'ABarray'
Formats: text html latex example
ABarray text html latex example
Note: removing empty section \arguments in file 'ABarrayGUI.Rd'
ABarrayGUI text html latex example
Note: removing empty section \examples in file 'calcsn.Rd'
calcsn text html latex
concord text html latex example
Note: removing empty section \examples in file 'cvv.Rd'
cvv text html latex
Note: removing empty section \examples in file 'cvvPlot.Rd'
cvvPlot text html latex
doANOVA text html latex example
doLPE text html latex example
doPlotEset text html latex example
doPlotFCT text html latex example
Note: removing empty section \examples in file 'doVennDiagram.Rd'
doVennDiagram text html latex
drawVennDiagram text html latex example
Note: removing empty section \examples in file 'getMemberEset.Rd'
getMemberEset text html latex
Note: removing empty section \examples in file 'getPantherMap.Rd'
getPantherMap text html latex
Note: removing empty section \examples in file 'hclusterPlot.Rd'
hclusterPlot text html latex
icpPlot text html latex example
imputeFlag text html latex example
lpe.fdr.BH text html latex example
mamaplot text html latex example
Note: removing empty section \examples in file 'matrixPlot.Rd'
matrixPlot text html latex
mvaPair2 text html latex example
panel.cor text html latex example
panel.scatter text html latex example
Note: removing empty section \examples in file 'qnNormalize.Rd'
qnNormalize text html latex
rgcolorsfunc text html latex example
Note: removing empty section \examples in file 'savejpg.Rd'
savejpg text html latex
scaleColorBar text html latex example
Note: removing empty section \examples in file 'snSummary.Rd'
snSummary text html latex
** building package indices ...
* DONE (ABarray)