stam 1.8.0
Claudio Lottaz
| Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/stam | | Last Changed Rev: 31430 / Revision: 33132 | | Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | [ OK ] | OK | OK |
* checking for file 'stam/DESCRIPTION' ... OK
* preparing 'stam':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'stam' ...
** libs
** arch - i386
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -fPIC -g -O2 -march=nocona -c util.c -o util.o
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o stam.so util.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -c util.c -o util.o
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o stam.so util.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** data
** inst
** preparing package for lazy loading
Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: DBI
Loading required package: RSQLite
Loading required package: pamr
Loading required package: cluster
Loading required package: survival
Loading required package: splines
Loading required package: annaffy
Loading required package: KEGG.db
** help
>>> Building/Updating help pages for package 'stam'
Formats: text html latex example
golubTrain.cv text html latex
golubTrain.fit text html latex
image.stamPrediction text html latex
plot.stamCV text html latex
plot.stamFit text html latex
plot.stamPrediction text html latex
stam-internal text html latex
stam.cv text html latex example
stam.evaluate text html latex example
stam.fit text html latex example
stam.graph.plot text html latex
stam.net text html latex example
stam.predict text html latex example
stam.rgb.colors text html latex example
stam.serve text html latex example
stam.writeHTML text html latex example
stamCV-class text html latex
stamEval-class text html latex
stamFit-class text html latex
stamINode-class text html latex
stamLeaf-class text html latex
stamNet-class text html latex
stamNode-class text html latex
stamPrediction-class text html latex
** building package indices ...
Loading required package: methods
Loading required package: utils
Welcome to Structured Analysis of Microarrays
* DONE (stam)
* creating vignettes ... OK
* cleaning src
* removing junk files
* excluding invalid files from 'stam'
Subdirectory 'R' contains invalid file names:
TAGS
Subdirectory 'man' contains invalid file names:
TAGS
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'stam_1.8.0.tar.gz'