cosmoGUI 1.6.0
Oliver Bembom
| Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/cosmoGUI | | Last Changed Rev: 31430 / Revision: 33132 | | Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | [ OK ] | OK |
* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.2-bioc/meat/cosmoGUI.Rcheck'
* using R version 2.7.1 (2008-06-23)
* using session charset: ASCII
* checking for file 'cosmoGUI/DESCRIPTION' ... OK
* this is package 'cosmoGUI' version '1.6.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'cosmoGUI' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
advanced: no visible binding for '<<-' assignment to 'COSMO.WIDGET'
advancedBuild: no visible binding for '<<-' assignment to
'COSMO.CONSTRAINTS'
constraintBuilder: no visible binding for global variable
'COSMO.CONSTRAINTS'
constraintBuilder: no visible binding for '<<-' assignment to
'COSMO.CONSTRAINTS'
mysample: no visible binding for '<<-' assignment to 'COSMO.WIDGET'
sampleA: no visible binding for '<<-' assignment to 'COSMO.CONSTRAINTS'
sampleICBound: no visible binding for '<<-' assignment to
'COSMO.CONSTRAINTS'
sampleICStep: no visible binding for '<<-' assignment to
'COSMO.CONSTRAINTS'
sampleV: no visible binding for '<<-' assignment to 'COSMO.CONSTRAINTS'
subMotif: no visible binding for '<<-' assignment to
'COSMO.CONSTRAINTS'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating cosmoGUI-Ex.R ... OK
* checking examples ... OK
* creating cosmoGUI-manual.tex ... OK
* checking cosmoGUI-manual.tex using pdflatex ... OK
* Installing *source* package 'cosmoGUI' ...
** R
** preparing package for lazy loading
Loading required package: tkWidgets
Loading required package: widgetTools
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: DynDoc
Loading required package: tools
Loading required package: cosmo
Loading required package: seqLogo
Loading required package: grid
Welcome to cosmo version 1.6.0
cosmo is free for research purposes only. For more details, type
license.cosmo(). Type citation('cosmo') for details on how to cite
cosmo in publications.
** help
Note: removing empty section \seealso
>>> Building/Updating help pages for package 'cosmoGUI'
Formats: text html latex example
constraintBuilder text html latex example
** building package indices ...
* DONE (cosmoGUI)