bgx 1.4.1
Ernest Turro
| Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/bgx | | Last Changed Rev: 31625 / Revision: 33132 | | Last Changed Date: 2008-05-12 06:26:19 -0700 (Mon, 12 May 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for file 'bgx/DESCRIPTION' ... OK
* preparing 'bgx':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.2-bioc/tmpdir/Rinst557602664
---------- Making package bgx ------------
Untarring Boost header files...
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making qnorm.d from qnorm.c
making bgx.d from bgx.cc
making bgx_frontend.d from bgx_frontend.cc
making rundir.d from rundir.cc
making sokal.d from sokal.cc
gcc -std=gnu99 -I ../boostIncl -Ie:/biocbld/bbs-2.2-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -std=c99 -O3 -Wall -c qnorm.c -o qnorm.o
g++ -I ../boostIncl -Ie:/biocbld/bbs-2.2-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c bgx.cc -o bgx.o
g++ -I ../boostIncl -Ie:/biocbld/bbs-2.2-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c bgx_frontend.cc -o bgx_frontend.o
g++ -I ../boostIncl -Ie:/biocbld/bbs-2.2-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c rundir.cc -o rundir.o
g++ -I ../boostIncl -Ie:/biocbld/bbs-2.2-bioc/R/include -DUSING_R -march=i486 -ffast-math -O3 -O2 -Wall -c sokal.cc -o sokal.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.2-bioc/R/include -i bgx_res.rc -o bgx_res.o
g++ -shared -s -o bgx.dll bgx.def qnorm.o bgx.o bgx_frontend.o rundir.o sokal.o bgx_res.o -Le:/biocbld/bbs-2.2-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
preparing package bgx for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: splines
installing man source files
installing indices
installing help
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \value
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \value
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \examples
>>> Building/Updating help pages for package 'bgx'
Formats: text html latex example chm
analysis.bgx text html latex chm
bgx text html latex example chm
mcmc.bgx text html latex chm
readOutput.bgx text html latex chm
saveAffinityPlot.bgx text html latex chm
setupVars.bgx text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\bgx\chm\bgx.chm
Compile time: 0 minutes, 0 seconds
7 Topics
35 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\bgx\chm\bgx.chm, 27,354 bytes
Compression decreased file by 4,952 bytes.
adding MD5 sums
* DONE (bgx)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'bgx_1.4.1.tar.gz'