BioC experimental data: CHECK report for waveTilingData on petty
This page was generated on 2014-10-04 17:43:24 -0700 (Sat, 04 Oct 2014).
waveTilingData 1.0.0 Kristof De Beuf
Snapshot Date: 2014-10-04 07:15:22 -0700 (Sat, 04 Oct 2014) | URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_2_14/experiment/pkgs/waveTilingData | Last Changed Rev: 2799 / Revision: 3055 | Last Changed Date: 2014-04-11 14:27:08 -0700 (Fri, 11 Apr 2014) |
| zin2 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | NotNeeded | OK | OK | |
moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | OK |
petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | [ OK ] | OK |
Summary
Package: waveTilingData |
Version: 1.0.0 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch waveTilingData_1.0.0.tar.gz |
StartedAt: 2014-10-04 09:43:35 -0700 (Sat, 04 Oct 2014) |
EndedAt: 2014-10-04 09:47:09 -0700 (Sat, 04 Oct 2014) |
EllapsedTime: 214.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: waveTilingData.Rcheck |
Warnings: 0 |
Command output
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch waveTilingData_1.0.0.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-2.14-data-experiment/meat/waveTilingData.Rcheck’
* using R version 3.1.1 (2014-07-10)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘waveTilingData/DESCRIPTION’ ... OK
* this is package ‘waveTilingData’ version ‘1.0.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘waveTilingData’ can be installed ... [2s/6s] OK
* checking installed package size ... NOTE
installed size is 240.8Mb
sub-directories of 1Mb or more:
data 240.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... NOTE
Error in .requirePackage(package) :
unable to find required package 'waveTiling'
Calls: <Anonymous> ... .findInheritedMethods -> getClass -> getClassDef -> .requirePackage
Execution halted
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [82s/82s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
leafdev 45.809 1.274 47.086
leafdevBQ 21.648 0.806 22.455
leafdevMapAndFilterTAIR9 9.549 0.117 9.666
* checking PDF version of manual ... OK
NOTE: There were 2 notes.
See
‘/Users/biocbuild/bbs-2.14-data-experiment/meat/waveTilingData.Rcheck/00check.log’
for details.
waveTilingData.Rcheck/00install.out:
* installing *source* package ‘waveTilingData’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (waveTilingData)
waveTilingData.Rcheck/waveTilingData-Ex.timings:
name | user | system | elapsed
|
leafdev | 45.809 | 1.274 | 47.086 |
|
leafdevBQ | 21.648 | 0.806 | 22.455 |
|
leafdevFit | 0.903 | 0.053 | 0.956 |
|
leafdevInfCompare | 0.900 | 0.060 | 0.959 |
|
leafdevMapAndFilterTAIR9 | 9.549 | 0.117 | 9.666 |
|