BioC experimental data: CHECK report for Affymoe430Expr on moscato2

Package: Affymoe430Expr

Version: 0.99.0

Command: rm -rf Affymoe430Expr.buildbin-libdir && mkdir Affymoe430Expr.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=Affymoe430Expr.buildbin-libdir Affymoe430Expr_0.99.0.tar.gz >Affymoe430Expr-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=Affymoe430Expr.buildbin-libdir --install="check:Affymoe430Expr-install.out" --force-multiarch --no-vignettes --timings Affymoe430Expr_0.99.0.tar.gz && mv Affymoe430Expr.buildbin-libdir/* Affymoe430Expr.Rcheck/ && rmdir Affymoe430Expr.buildbin-libdir

StartedAt: 2014-03-03 12:45:54 -0800 (Mon, 03 Mar 2014)

EndedAt: 2014-03-03 13:08:00 -0800 (Mon, 03 Mar 2014)

EllapsedTime: 1325.8 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: Affymoe430Expr.Rcheck

Warnings: 1

* using log directory 'E:/biocbld/bbs-2.14-data-experiment/meat/Affymoe430Expr.Rcheck'
* using R Under development (unstable) (2014-02-17 r65021)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Affymoe430Expr/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'Affymoe430Expr' version '0.99.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'Affymoe430Expr' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 411.1Mb
  sub-directories of 1Mb or more:
    extdata  410.0Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented data sets:
  'Affymoe430Exprtab.rda'
All user-level objects in a package should have documentation entries.
See the chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [1s] OK
** running examples for arch 'x64' ... [1s] OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  'E:/biocbld/bbs-2.14-data-experiment/meat/Affymoe430Expr.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'Affymoe430Expr' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'Affymoe430Expr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Affymoe430Expr' as Affymoe430Expr_0.99.0.zip
* DONE (Affymoe430Expr)

name	user	system	elapsed
Affymoe430Expr	0.23	0.03	0.27
Affymoe430Exprtab	0.05	0.00	0.04

name	user	system	elapsed
Affymoe430Expr	0.20	0.03	0.24
Affymoe430Exprtab	0.05	0.00	0.04