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Package 624/631HostnameOS / ArchBUILDCHECKBUILD BIN
widgetTools 1.37.0
Jianhua Zhang
Snapshot Date: 2013-01-15 17:01:14 -0800 (Tue, 15 Jan 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/widgetTools
Last Changed Rev: 70052 / Revision: 72575
Last Changed Date: 2012-10-01 15:43:56 -0700 (Mon, 01 Oct 2012)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
lamb2 Linux (openSUSE 11.4) / x86_64  OK [ OK ]
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: widgetTools
Version: 1.37.0
Command: /home/biocbuild/bbs-2.12-bioc/R/bin/R CMD check --no-vignettes --timings widgetTools_1.37.0.tar.gz
StartedAt: 2013-01-16 07:01:42 -0800 (Wed, 16 Jan 2013)
EndedAt: 2013-01-16 07:02:06 -0800 (Wed, 16 Jan 2013)
EllapsedTime: 24.8 seconds
RetCode: 0
Status:  OK 
CheckDir: widgetTools.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.12-bioc/meat/widgetTools.Rcheck’
* using R Under development (unstable) (2012-12-17 r61365)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘widgetTools/DESCRIPTION’ ... OK
* this is package ‘widgetTools’ version ‘1.37.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘widgetTools’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File ‘widgetTools/R/zzz.R’:
  .onLoad has wrong argument list ‘libname, pkgname, where’
  .onLoad calls:
    require("methods", quietly = TRUE)
  .onAttach calls:
    require("Biobase")

Package startup functions should have two arguments with names starting
  with ‘lib’ and ‘pkg’, respectively.
Package startup functions should not change the search path.
See section ‘Good practice’ in '?.onAttach'.

.getChanges: warning in get(wName(pWidgets[[i]]), env =
  wEnv(pWidgets[[i]])): partial argument match of 'env' to 'envir'
.putPW2Env : putOne: warning in assign(wName(pWidget), pWidget, env =
  wEnv(pWidget)): partial argument match of 'env' to 'envir'
updateCheck,widget: warning in get(PWName, env = wEnv(object)): partial
  argument match of 'env' to 'envir'
updateCheck,widget: warning in assign(wName(tempPW), tempPW, env =
  wEnv(tempPW)): partial argument match of 'env' to 'envir'
updateList,widget: warning in get(PWName, env = wEnv(object)): partial
  argument match of 'env' to 'envir'
updateList,widget: warning in assign(wName(tempPW), tempPW, env =
  wEnv(tempPW)): partial argument match of 'env' to 'envir'
updateRadio,widget: warning in get(PWName, env = wEnv(object)): partial
  argument match of 'env' to 'envir'
updateRadio,widget: warning in assign(wName(tempPW), tempPW, env =
  wEnv(tempPW)): partial argument match of 'env' to 'envir'
updateText,widget: warning in get(PWName, env = wEnv(object)): partial
  argument match of 'env' to 'envir'
updateText,widget: warning in assign(wName(tempPW), tempPW, env =
  wEnv(tempPW)): partial argument match of 'env' to 'envir'
updateList,widget: no visible binding for global variable ‘bName’
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  ‘/loc/home/biocbuild/bbs-2.12-bioc/meat/widgetTools.Rcheck/00check.log’
for details.

widgetTools.Rcheck/00install.out:

* installing *source* package ‘widgetTools’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘widgetTools.Rnw’ 
** testing if installed package can be loaded

* DONE (widgetTools)

widgetTools.Rcheck/widgetTools-Ex.timings:

nameusersystemelapsed
basicPW-class0.0320.0000.031
button0.1320.0000.132
dropdownList0.0120.0040.015
makeViewer0.0080.0040.013
oneVScrList0.0040.0080.014
safeFileOpen0.0120.0120.025
tooltip0.0000.0080.011
widget-class0.0360.0080.045
widgetView-class0.0080.0040.013
writeText0.0120.0040.017