Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R [S] T  U  V  W  X  Y  Z 

Package 616/671HostnameOS / ArchBUILDCHECKBUILD BIN
SplicingGraphs 1.0.1
H. Pages
Snapshot Date: 2013-04-30 17:01:37 -0700 (Tue, 30 Apr 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/SplicingGraphs
Last Changed Rev: 75282 / Revision: 76155
Last Changed Date: 2013-04-04 00:09:16 -0700 (Thu, 04 Apr 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  ERROR  skipped 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  ERROR  skipped  skipped 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  ERROR  skipped  skipped 
pelham Mac OS X Snow Leopard (10.6.8) / x86_64 [ ERROR ] skipped  skipped 

Summary

Package: SplicingGraphs
Version: 1.0.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SplicingGraphs
StartedAt: 2013-05-01 01:38:26 -0700 (Wed, 01 May 2013)
EndedAt: 2013-05-01 01:40:22 -0700 (Wed, 01 May 2013)
EllapsedTime: 115.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'SplicingGraphs/DESCRIPTION' ... OK
* preparing 'SplicingGraphs':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: GenomicFeatures
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport,
    clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply,
    parSapply, parSapplyLB

The following object is masked from 'package:stats':

    xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, as.data.frame, cbind,
    colnames, duplicated, eval, get, intersect, lapply, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rep.int,
    rownames, sapply, setdiff, sort, table, tapply, union, unique, unlist

Loading required package: IRanges
Loading required package: GenomicRanges
Loading required package: AnnotationDbi
Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with 'browseVignettes()'. To
    cite Bioconductor, see 'citation("Biobase")', and for packages
    'citation("pkgname")'.

Loading required package: Rgraphviz
Loading required package: graph
Loading required package: grid
Loading required package: Rsamtools
Loading required package: Biostrings

Attaching package: 'Biostrings'

The following object is masked from 'package:graph':

    complement


Error: processing vignette 'SplicingGraphs.Rnw' failed with diagnostics:
 chunk 6 (label = loadPrecomputed_sg) 
Error in eval(expr, envir, enclos) : 
  'sg' is not identical to precomputed version
Execution halted