Package: flowQB

Version: 1.1.1

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch flowQB_1.1.1.tar.gz

StartedAt: 2013-03-24 05:06:43 -0700 (Sun, 24 Mar 2013)

EndedAt: 2013-03-24 05:09:41 -0700 (Sun, 24 Mar 2013)

EllapsedTime: 178.6 seconds

RetCode: 0

Status:  OK

CheckDir: flowQB.Rcheck

Warnings: 0

* using log directory '/Users/biocbuild/bbs-2.12-bioc/meat/flowQB.Rcheck'
* using R version 3.0.0 beta (2013-03-21 r62346)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'flowQB/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowQB' version '1.1.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'flowQB' can be installed ... [8s/8s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... [96s/96s] OK
Examples with CPU or elapsed time > 5s
                          user system elapsed
DiscriminantExamination 15.666  0.205  15.935
KmeansMeanSD            15.500  0.154  15.795
MFI2MESF                15.028  0.177  15.323
qrMESF                  14.868  0.170  15.332
flowQB-package          14.815  0.152  14.969
lrMESF                  13.992  0.139  14.149
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'flowQB' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'flowQB_Sweave_.Rnw' using 'UTF-8' 
** testing if installed package can be loaded
* DONE (flowQB)

name	user	system	elapsed
DiscriminantExamination	15.666	0.205	15.935
KmeansMeanSD	15.500	0.154	15.795
KmeansMedianrSD	0.007	0.003	0.009
MFI2MESF	15.028	0.177	15.323
ReadDD	0.663	0.054	0.717
flowQB-package	14.815	0.152	14.969
lrMESF	13.992	0.139	14.149
qrMESF	14.868	0.170	15.332