tilingArray 1.16.0
W. Huber
| Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/tilingArray | | Last Changed Rev: 27709 / Revision: 30966 | | Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | [ OK ] | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for file 'tilingArray/DESCRIPTION' ... OK
* preparing 'tilingArray':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'tilingArray' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c findsegments.c -o findsegments.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c sampleStep.c -o sampleStep.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o tilingArray.so findsegments.o sampleStep.o -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: RColorBrewer
Loading required package: grid
Loading required package: strucchange
Loading required package: zoo
Loading required package: sandwich
Loading required package: vsn
Loading required package: limma
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: geneplotter
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
Loading required package: lattice
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: pixmap
** help
>>> Building/Updating help pages for package 'tilingArray'
Formats: text html latex example
PMindex text html latex example
breakpointsPretend text html latex
class-segmentation text html latex example
comparisonPlot text html latex example
costMatrix text html latex example
findsegments text html latex example
normalizeByReference text html latex example
otherStrand text html latex example
plotAlongChrom text html latex example
plotAlongChromLegend text html latex example
plotFeatures text html latex example
plotSegmentationDots text html latex example
plotSegmentationHeatmap text html latex example
plotpenLL text html latex example
posMin text html latex example
qcPlots text html latex example
readCel2eSet text html latex example
sampleStep text html latex example
segChrom text html latex example
segment text html latex example
tilingArray-package text html latex
** building package indices ...
* DONE (tilingArray)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'tilingArray_1.16.0.tar.gz'