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Package 207/233HostnameOS / ArchBUILDCHECKBUILD BIN
simulatorAPMS 1.10.0
Tony Chiang
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/simulatorAPMS
Last Changed Rev: 27709 / Revision: 30966
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: simulatorAPMS
Version: 1.10.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build simulatorAPMS
StartedAt: 2008-04-09 16:57:03 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 16:58:18 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 74.7 seconds
RetCode: 0
Status: OK
PackageFile: simulatorAPMS_1.10.0.tar.gz
PackageFileSize: 173 KiB

Command output

* checking for file 'simulatorAPMS/DESCRIPTION' ... OK
* preparing 'simulatorAPMS':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst482492108


---------- Making package simulatorAPMS ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
Note: unmatched right brace in 'filteredProt' on or after line 14
Note: unmatched right brace in 'filteredProt.Rd' on or after line 14
 >>> Building/Updating help pages for package 'simulatorAPMS'
     Formats: text html latex example chm 
  APComEX                           text    html    latex   example chm
  PPIEX                             text    html    latex   example chm
  TSNMatrix                         text    html    latex   example chm
  applyDeformationError             text    html    latex   example chm
  applyFNErrors                     text    html    latex   example chm
  applyFPErrors                     text    html    latex   example chm
  applyStickyError                  text    html    latex   example chm
  compIndep                         text    html    latex   example chm
  filteredProt                      text    html    latex   example chm
  fullSimEX                         text    html    latex   example chm
  missedProtEX                      text    html    latex   example chm
  missedProtHMSPCI                  text    html    latex   example chm
  recordSticky                      text    html    latex   example chm
  runAPComplex                      text    html    latex   example chm
  runCompIndep                      text    html    latex   example chm
  runSimEX                          text    html    latex   example chm
  runSimulators                     text    html    latex   example chm
  simEX                             text    html    latex   example chm
  simulator                         text    html    latex   example chm
  simulatorD                        text    html    latex   example chm
  simulatorS                        text    html    latex   example chm
  vBaits                            text    html    latex   example chm
  vBaitsEX                          text    html    latex   example chm
  vDeformEX                         text    html    latex   example chm
  vDeformed                         text    html    latex   example chm
  vDeformedEX                       text    html    latex   example chm
  vStickyEX                         text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "x\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\simulatorAPMS\chm\simulatorAPMS.chm



HHC4016: Warning: Cannot open "x\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  adding MD5 sums

* DONE (simulatorAPMS)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'simulatorAPMS_1.10.0.tar.gz'