maanova 1.8.1
Hyuna Yang
| Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/maanova | | Last Changed Rev: 30408 / Revision: 30966 | | Last Changed Date: 2008-03-07 16:33:21 -0800 (Fri, 07 Mar 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | [ OK ] | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/maanova.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'maanova/DESCRIPTION' ... OK
* this is package 'maanova' version '1.8.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'maanova' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
matest: no visible binding for global variable 'ttest.method'
matest.perm: no visible binding for global variable 'random'
read.madata: no visible global function definition for 'Warning'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating maanova-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating maanova-manual.tex ... OK
* checking maanova-manual.tex ... OK
* Installing *source* package 'maanova' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c makeratio.c -o makeratio.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c masvd.c -o masvd.o
masvd.c:114:2: warning: "/*" within comment
masvd.c:154:1: warning: "/*" within comment
masvd.c:161:5: warning: "/*" within comment
masvd.c:165:2: warning: "/*" within comment
masvd.c:189:2: warning: "/*" within comment
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c shift.c -o shift.o
shift.c: In function 'shift':
shift.c:27: warning: unused variable 'k'
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c util.c -o util.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o maanova.so makeratio.o masvd.o shift.o util.o -L/home/biocbuild/bbs-2.1-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-2.1-bioc/R/lib -lRblas -lgfortran -lm -lgcc_s -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
>>> Building/Updating help pages for package 'maanova'
Formats: text html latex example
PairContrast text html latex example
Rmaanova.version text html latex example
abf1 text html latex example
adjPval text html latex example
arrayview text html latex example
consensus text html latex example
dyeswapfilter text html latex example
fill.missing text html latex example
fitmaanova text html latex example
fom text html latex example
geneprofile text html latex example
gridcheck text html latex example
kidney text html latex example
maanova-internal text html latex example
macluster text html latex example
matest text html latex example
read.madata text html latex example
resiplot text html latex example
riplot text html latex example
subset.madata text html latex example
summarytable text html latex example
transform.madata text html latex example
varplot text html latex example
volcano text html latex example
write.madata text html latex example
** building package indices ...
* DONE (maanova)