BioC 2.1: CHECK report for pgUtils on wellington

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/pgUtils.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'pgUtils/DESCRIPTION' ... OK
* this is package 'pgUtils' version '1.10.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pgUtils' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
dbColnames: no visible binding for global variable 'res'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating pgUtils-Ex.R ... OK
* checking examples ... OK
* creating pgUtils-manual.tex ... OK
* checking pgUtils-manual.tex ... OK

* Installing *source* package 'pgUtils' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Rdbi
Loading required package: RdbiPgSQL

Attaching package: 'RdbiPgSQL'


	The following object(s) are masked from package:Rdbi :

	 dbAppendTable 

** help
 >>> Building/Updating help pages for package 'pgUtils'
     Formats: text html latex example 
  AutoReference                     text    html    latex   example
  auto.fk.name                      text    html    latex   example
  auto.pk.name                      text    html    latex   example
  auto.pk.seq                       text    html    latex   example
  createDBTable                     text    html    latex   example
  createSequence                    text    html    latex
  dbColnames                        text    html    latex
  dbListDatabases                   text    html    latex
  dbListSequences                   text    html    latex
  deleteDBEntry                     text    html    latex   example
  do.log                            text    html    latex
  getRefAttribute-methods           text    html    latex
  getRefColumn-methods              text    html    latex
  getRefTable-methods               text    html    latex
  getSourceAttribute-methods        text    html    latex
  getSourceColumn-methods           text    html    latex
  insertIntoTable                   text    html    latex   example
  log.file                          text    html    latex
  log.level                         text    html    latex
  loggit                            text    html    latex   example
  searchIn                          text    html    latex   example
  updateDBTable                     text    html    latex   example
** building package indices ...
* DONE (pgUtils)

Package 162/234	Hostname	OS	Arch	BUILD	CHECK	BUILD BIN
pgUtils 1.10.0 Johannes Rainer Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709	lamb1	Linux (SUSE 10.1)	x86_64	OK	OK
	wellington	Linux (SUSE 9.2)	i686	OK	[ OK ]
	liverpool	Windows Server 2003 R2 (32-bit)	x64	N O T S U P P O R T E D
	pitt	Mac OS X (10.4.10)	i386	OK	OK	OK

Command output