Package: logicFS

Version: 1.8.0

Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check logicFS_1.8.0.tar.gz

RetCode: 0

Time: 47.1 seconds

Status: OK

CheckDir: logicFS.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/logicFS.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'logicFS/DESCRIPTION' ... OK
* this is package 'logicFS' version '1.8.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'logicFS' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
logic.bagging.default: no visible binding for global variable 'cl'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating logicFS-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating logicFS-manual.tex ... OK
* checking logicFS-manual.tex ... OK

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/logicFS.Rcheck


---------- Making package logicFS ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'logicFS'
     Formats: text html latex example chm 
  data.logicfs                      text    html    latex           chm
  getMatEval                        text    html    latex           chm
  logic.bagging                     text    html    latex   example chm
  logic.oob                         text    html    latex           chm
  logic.pimp                        text    html    latex           chm
  logicFS-internal                  text    html    latex           chm
  logicFS                           text    html    latex   example chm
  make.snp.dummy                    text    html    latex           chm
  minDNF                            text    html    latex           chm
  plot.logicFS                      text    html    latex           chm
  predict.logicBagg                 text    html    latex           chm
  print.logicFS                     text    html    latex           chm
  vim.chisq                         text    html    latex           chm
  vim.ebam                          text    html    latex           chm
  vim.logicFS                       text    html    latex           chm
  vim.norm                          text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\logicFS.Rcheck\00_pkg_src\logicFS\chm\logicFS.chm


Compile time: 0 minutes, 0 seconds
17	Topics
91	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\logicFS.Rcheck\00_pkg_src\logicFS\chm\logicFS.chm, 39,120 bytes
Compression decreased file by 36,816 bytes.
  preparing package logicFS for lazy loading
Loading required package: LogicReg
Loading required package: survival
Loading required package: splines
  adding MD5 sums

* DONE (logicFS)