Package: gpls

Version: 1.10.0

Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check gpls_1.10.0.tar.gz

RetCode: 0

Time: 128.8 seconds

Status: OK

CheckDir: gpls.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/gpls.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'gpls/DESCRIPTION' ... OK
* this is package 'gpls' version '1.10.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'gpls' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'predict.gpls':
  predict.gpls

The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter 'Writing R documentation files' in manual 'Writing R
Extensions'.
* creating gpls-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating gpls-manual.tex ... OK
* checking gpls-manual.tex ... OK

* Installing *source* package 'gpls' ...
** R
** inst
** help
 >>> Building/Updating help pages for package 'gpls'
     Formats: text html latex example 
  glpls1a                           text    html    latex   example
  glpls1a.cv.error                  text    html    latex   example
  glpls1a.logit.all                 text    html    latex   example
  glpls1a.mlogit                    text    html    latex   example
  glpls1a.mlogit.cv.error           text    html    latex   example
  glpls1a.train.test.error          text    html    latex   example
  gpls                              text    html    latex   example
  predict.gpls                      text    html    latex   example
** building package indices ...
* DONE (gpls)